DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc14A and Hml

DIOPT Version :9

Sequence 1:NP_727928.3 Gene:Muc14A / 318097 FlyBaseID:FBgn0052580 Length:16223 Species:Drosophila melanogaster
Sequence 2:NP_524060.2 Gene:Hml / 39529 FlyBaseID:FBgn0029167 Length:3843 Species:Drosophila melanogaster


Alignment Length:870 Identity:161/870 - (18%)
Similarity:281/870 - (32%) Gaps:295/870 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 IIFEFETITFSDAPEPN-----SDITGYT-------STECIKCSELTTTVPIETTIERTKLSETP 495
            |....|.:...|..||.     |.|...|       ..|||....:......:..::.:.|.:.|
  Fly  2216 IAMRVELLICGDKEEPKPVPTVSTILPITERPARLVDLECIDLMGVDEGKMYQDQVQSSSLWQQP 2280

  Fly   496 --------LQKLQFSTP------KKSTNRFASVLQLNAVTDSSIKVLNTK--TDQFDTEEETSLS 544
                    |:.|:.|||      ..|.|.|   ::.:.:...:|....||  .|.:.|..:...|
  Fly  2281 NLGKKLQLLELLKLSTPLAWRPLANSQNEF---IEFDFLEPRNISGFVTKGGPDGWVTGYKVMFS 2342

  Fly   545 EFLPEWPTVLGSSLQFSTIETQPSTNNGQLTHTEKTTLSKSINHIKHH---KINLGQNAEAASHF 606
            :..|.|.|||.:..|....|........:..|.:...|::.|..:..:   .||:          
  Fly  2343 KKKPTWNTVLSTDGQARIFEANHDAETERRHHFKNPILTQYIKIVPAYWEKNINM---------- 2397

  Fly   607 NIQPGALHTISTTGGY--HPTVKKKQSETLPLLSTKSISLNMCD----------CTCKLEIAKD- 658
            .|:|        .|.:  :|.::::    :|:..:|....|:||          |.|:.::..| 
  Fly  2398 RIEP--------LGCFLPYPEIQRQ----VPVEESKPTKCNICDGVSTSSSTTGCQCQDQLFWDG 2450

  Fly   659 -SCI----CECNLKKSTSDISKGVTASASNQSLPTETNRKLHSMKDYA--PNGTSLLTNASPEPF 716
             :|:    |.|                                :::|.  |.|:....:|..:..
  Fly  2451 NTCVQHNLCPC--------------------------------IENYVSYPIGSKFENSACEDCV 2483

  Fly   717 TIDDVTYKGNLAGKKTTMPSELSSL--KKIEPVKTHDVCECTC--------LLEQGNDSCT---- 767
            .:        |.|.|...|.:....  .|:.||.|.| |.|.|        |.....| |.    
  Fly  2484 CV--------LGGHKNCKPKKCPPCLGGKLRPVITSD-CFCKCEPCPKHQRLCPSSGD-CIPEIL 2538

  Fly   768 -CN----CMTDFISTSIQISSTGPDQISQNKMGNQSQ----SVPLLNTEFSDLMKISTTYKMHQT 823
             ||    |..|..::.....:..|| :|:.|  |:::    .||:...:    |||..|.|..:.
  Fly  2539 WCNGVQDCADDEDASCSDSFTVEPD-VSREK--NETEVITCPVPVCPPQ----MKIRITEKKSRK 2596

  Fly   824 QNDIEKLSKSPPVLSTTSSGLPKWPTTRTLEK---KKQQSKSLPSLSTISNFHFEKSNFHGCDCT 885
            .:.:...||.   :|....|     ||.|..|   .|:|..::|:...  :|..|:.    ||  
  Fly  2597 MSKMFTFSKQ---VSIVDDG-----TTITKTKFISSKEQILAMPNREL--DFQLEEQ----CD-- 2645

  Fly   886 CQLELGRDSCICECNFKESTSDVSTSRSNQPLPTKLHSVKDNAPHSLTNANPESLTSKDLTTKGN 950
                  ..:|:                   |:|:|  .|..|...:.|..........:|....:
  Fly  2646 ------EFTCV-------------------PIPSK--QVDKNETVTCTEPKCPEKYDVELDMSAS 2683

  Fly   951 GVTD-NKITTLSKLSSDNVCE------------------CTCLLEQGNDSCTCN------CMTDT 990
            .|.| .:.:.:.:.:.|:|||                  |:.:|.:...|.:.:      |..:|
  Fly  2684 KVGDCLRYSCVLRPNKDDVCEISGKSFTTFDGTVFKYGPCSHILARDIHSSSWSISVHQQCSDET 2748

  Fly   991 NSIDESILTASQIVSSEDL-----------------QYSSNPPSYKSTQENTNTKGKNKNLSTLL 1038
            ..:...::|.....:..:|                 |...|.|..|::.. .:..||     |||
  Fly  2749 RKVCHKVITIQDTEAGNELILLPHLKLKFNGYEFTVQQLINSPICKASFV-VSQPGK-----TLL 2807

  Fly  1039 QISSTGPYQIYQSEIGNQSQYVPPSSTLFSDITKISNTDKDHPTLD--------EEENISKSP-- 1093
            .:|:...:.:...:||               |.|:..:.|...|:|        .:::..:||  
  Fly  2808 AVSTKYGFWVQLDDIG---------------IVKVGISSKFIRTVDGLCGYYNGNQKDDKRSPDG 2857

  Fly  1094 --------LHLSTTSSSLPK----------------IQITGVSHLP-FLSTISNIKFEQSSFHGC 1133
                    ...|.....:||                :|:..:.|.| |......:.::|...:.|
  Fly  2858 QIIPNTEKFGDSWYDKRIPKDQCGDLKCPREMQAKALQLCNIIHHPTFARCHKAVNYKQFLNNYC 2922

  Fly  1134 ---DCTCQLEIGKDSCICECNLKES 1155
               .|.|.:....|...|:||:.||
  Fly  2923 LEAACNCMMANNGDPAACKCNILES 2947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc14ANP_727928.3 PRK14949 <11377..11776 CDD:237863
PRK08581 11922..>12215 CDD:236304
PRK14949 <13679..14114 CDD:237863
PRK14949 <14663..15055 CDD:237863
HmlNP_524060.2 VWD 485..636 CDD:295339
C8 680..754 CDD:285899
TIL 758..811 CDD:280072
VWD 840..1015 CDD:214566
C8 1054..1121 CDD:214843
TIL 1131..1185 CDD:280072
TIL 1245..1298 CDD:280072
VWD 1327..1498 CDD:214566
C8 1535..1609 CDD:214843
Mucin2_WxxW 1751..1837 CDD:290069
TIL 1938..2005 CDD:280072
FA58C 2089..2223 CDD:238014 2/6 (33%)
FA58C 2104..2225 CDD:214572 2/8 (25%)
FA58C <2299..2404 CDD:214572 23/125 (18%)
FA58C <2299..2403 CDD:238014 23/124 (19%)
VWD 2703..2858 CDD:295339 28/175 (16%)
C8 2893..2970 CDD:285899 14/55 (25%)
TIL 2974..3030 CDD:280072
VWD 3035..3198 CDD:295339
C8 3257..3313 CDD:285899
VWC 3397..3451 CDD:302663
GHB_like <3755..3813 CDD:304424
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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