DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc14A and COCH

DIOPT Version :9

Sequence 1:NP_727928.3 Gene:Muc14A / 318097 FlyBaseID:FBgn0052580 Length:16223 Species:Drosophila melanogaster
Sequence 2:NP_001334649.1 Gene:COCH / 1690 HGNCID:2180 Length:615 Species:Homo sapiens


Alignment Length:623 Identity:120/623 - (19%)
Similarity:190/623 - (30%) Gaps:223/623 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly 15136 PWTLSTSPPQSSSNTIKTTE-----TSEEPLCLCTCV-------------IDPDED----ICSCN 15178
            ||. |..||:.....::...     |....|.|.||.             :|..::    :|...
Human    55 PWA-SALPPEEEGAKVEPPRGAPALTPAADLLLLTCFSHAPIAITCFTRGLDIRKEKADVLCPGG 118

  Fly 15179 CKITKSIPTG----------------RTTSKHSQWDGSSTKALGLDGTEDQKTFDATQNSMTIGL 15227
            |.:.:....|                |....:|   |...:...|.|.|:..:.||  |.:...:
Human   119 CPLEEFSVYGNIVYASVSSICGAAVHRGVISNS---GGPVRVYSLPGRENYSSVDA--NGIQSQM 178

  Fly 15228 LSK-EPTQTLTFSKLSTTQIITEKSTSNNLSVHSNIDKSTISTQPYFDTDTTKYSTSVGVLSEES 15291
            ||: ..:.|:|..| |:||..|.::.|   :.|....|....| |...|........:..|.:.|
Human   179 LSRWSASFTVTKGK-SSTQEATGQAVS---TAHPPTGKRLKKT-PEKKTGNKDCKADIAFLIDGS 238

  Fly 15292 SKLTKQ--NITEEITTNILSLPSNIATSTTLTQPH------SDTDKTE-AIQNQTTA-------- 15339
            ..:.::  |:.:.....: :|...|.|.    .||      |:..|.| .::|.|:|        
Human   239 FNIGQRRFNLQKNFVGKV-ALMLGIGTE----GPHVGLVQASEHPKIEFYLKNFTSAKDVLFAIK 298

  Fly 15340 ---------------GHTTQDSSVV--GLLSKEPTQTLTFSKLSPTQIITE-------------- 15373
                           .||.|....|  |:....|...:.|....|:..|.|              
Human   299 EVGFRGGNSNTGKALKHTAQKFFTVDAGVRKGIPKVVVVFIDGWPSDDIEEAGIVAREFGVNVFI 363

  Fly 15374 ----KSTTNNLSVHSN---IDKSTISTQPYFD------TDTTKY--------------------- 15404
                |.....|.:..:   :||:......:|.      ..||||                     
Human   364 VSVAKPIPEELGMVQDVTFVDKAVCRNNGFFSYHMPNWFGTTKYVKPLVQKLCTHEQMMCSKTCY 428

  Fly 15405 -STSVGVLSEESSKLTKQNITEEITTNILSLPSNIATSTTLTQPHSDTD-KTEAIQNQTTAGHTT 15467
             |.::..|.:.||.:...|.     ..:|...||||.:..:    ||.. |..|:|       .|
Human   429 NSVNIAFLIDGSSSVGDSNF-----RLMLEFVSNIAKTFEI----SDIGAKIAAVQ-------FT 477

  Fly 15468 QDSSVIGLLSKEPTQTLTFSKLSPTQIITEKSTSNN-LSVHSNIDNSTISTQPYFDTDTTKYSTS 15531
            .|            |...||       .|:.||..| |:|..||                :| .|
Human   478 YD------------QRTEFS-------FTDYSTKENVLAVIRNI----------------RY-MS 506

  Fly 15532 VGVLSEESSKLTKQNITEEITTNILSLPSNIATSTTLTQPHSDTDKTEAIQNQTTAGHTTQDSSV 15596
            .|..:.::...|.:|:...|..   |...|.....|..|.:.|      :|....|.|   |:.:
Human   507 GGTATGDAISFTVRNVFGPIRE---SPNKNFLVIVTDGQSYDD------VQGPAAAAH---DAGI 559

  Fly 15597 ----IGL----------LSKEPTQ-----TLTFSKLSP 15615
                :|:          ::.:|.:     |..|:.|.|
Human   560 TIFSVGVAWAPLDDLKDMASKPKESHAFFTREFTGLEP 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc14ANP_727928.3 PRK14949 <11377..11776 CDD:237863
PRK08581 11922..>12215 CDD:236304
PRK14949 <13679..14114 CDD:237863
PRK14949 <14663..15055 CDD:237863
COCHNP_001334649.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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