DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32579 and Capn10

DIOPT Version :9

Sequence 1:NP_001259606.1 Gene:CG32579 / 318096 FlyBaseID:FBgn0052579 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_113861.1 Gene:Capn10 / 63834 RGDID:69354 Length:666 Species:Rattus norvegicus


Alignment Length:63 Identity:17/63 - (26%)
Similarity:28/63 - (44%) Gaps:10/63 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ESYGYCAWTI--GSILVPMVVTSVIYIHTLKSAHAGEKRI-----LERGVYSNAVISYLFRDV 106
            ::.|...|.:  ..|.:|.|:::.....|  :.||.::.|     |..|.|. ||.|...:||
  Rat   412 QAVGLHIWKVEKRKISLPRVLSAPPVAGT--ACHAYDREIHLRCELSPGYYL-AVPSTFLKDV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32579NP_001259606.1 XK-related 25..353 CDD:286853 17/63 (27%)
Capn10NP_113861.1 CysPc 8..319 CDD:238004
Domain III 1 322..488 17/63 (27%)
calpain_III 338..488 CDD:214786 17/63 (27%)
Calpain_III 506..647 CDD:238132
Domain III 2 507..648
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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