DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32579 and Capn13

DIOPT Version :9

Sequence 1:NP_001259606.1 Gene:CG32579 / 318096 FlyBaseID:FBgn0052579 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001028616.1 Gene:Capn13 / 381122 MGIID:2685789 Length:665 Species:Mus musculus


Alignment Length:67 Identity:17/67 - (25%)
Similarity:28/67 - (41%) Gaps:28/67 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YGYCAWTIGSILVPMV--VTSVIYIH--------TLKSA-HAG-------------EKRILERGV 93
            |||    :...||.:.  |.::|.:|        |:|:| .||             |.:::|.|:
Mouse   183 YGY----LPDALVDLTGGVVTIINLHSSPFDLLTTVKTAIQAGSMVACATENGLTEEAKVMENGL 243

  Fly    94 YS 95
            .|
Mouse   244 VS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32579NP_001259606.1 XK-related 25..353 CDD:286853 17/67 (25%)
Capn13NP_001028616.1 Peptidase_C2 31..327 CDD:279042 17/67 (25%)
Calpain_III 343..469 CDD:294111
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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