DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2004 and pkdc

DIOPT Version :9

Sequence 1:NP_001259353.1 Gene:CG2004 / 31809 FlyBaseID:FBgn0030060 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_001335286.1 Gene:pkdc / 797003 ZFINID:ZDB-GENE-041111-115 Length:322 Species:Danio rerio


Alignment Length:343 Identity:64/343 - (18%)
Similarity:112/343 - (32%) Gaps:111/343 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 YG--VKEAEEGQDEKQLEISVIVK--AMPDNLHRRRLFRSVIFFRNEINFYTKVLPAIEAFQKSR 116
            ||  ::...||.|..    ||:||  ..|.|......:.:.|..:.::..|     .:|.:....
Zfish    31 YGEIIRVHLEGCDRP----SVVVKHVMFPQNQKHPGGWNTDISHQRKVRSY-----QVETYWYQN 86

  Fly   117 QPAPKKPFVEYPRCLASLCDGVNDFIALEDVGPRGYRAPVRQDYISLEDALLTMRTLGRFHGVAL 181
            ....:.  ...|.|||:...|....|.|||:...|:  |||:.|::..:....:..:..||.:.|
Zfish    87 YTTNEN--CRVPLCLAAKSFGEEQLIVLEDLDVAGF--PVRKTYVNDAEIKACLSWIANFHALFL 147

  Fly   182 ---------------------AFNALDSKNFEKAAGSLEETYYGEHTREWYTGFLLLAENVATDA 225
                                 ...|:..:..:.|||.::                          
Zfish   148 DVTPEGLWPIGTYWHLETRPEELEAMSDQKLKAAAGEID-------------------------- 186

  Fly   226 VKQIYPNSKYETVATNFLQPPLFDDLINLVSTRSKLSVFGHGDCWTPNFLTKYNERGQSEEIIII 290
              .|..|.:::|:.                          |||....||.  :::.|.  ::..:
Zfish   187 --SILNNCRFKTIV--------------------------HGDAKLANFC--FSKDGL--QVASV 219

  Fly   291 DFQLARCSSLALDLSFFIYSCTSQELREQHYDELLRAYLESAQDLIQDLGGNAESIISWESLQEE 355
            |||.........|:.:|:.||..:...|:....||..|       ..:|..:.|..:.:..|::|
Zfish   220 DFQYVGGGCGMKDVIYFLGSCMDERECEKKAPGLLDYY-------FSELRKSLEKKVDFAELEKE 277

  Fly   356 LKN--------FGRFGCG 365
            .:|        |.||..|
Zfish   278 WRNMFAFAWTDFHRFLLG 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2004NP_001259353.1 EcKinase 42..340 CDD:281023 55/308 (18%)
pkdcXP_001335286.1 PKc_like <96..267 CDD:304357 42/237 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D832683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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