Protein Alignment CG2004 and nhr-246

DIOPT Version :10

• Sequence 1: NP_572501.1
• Gene: CG2004 / 31809
• FlyBaseID: FBgn0030060
• Length: 425
• Species: Drosophila melanogaster
• Sequence 2: NP_001256661.1
• Gene: nhr-246 / 191499
• WormBaseID: WBGene00014192
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 377
• Identity: 83/377 - (22%)
• Similarity: 134/377 - (35%)
• Gaps: 111/377 - (29%)

  Fly    66 DEKQLEISVIVKAMPDNLHR-----------RRLFRSVI--FFRN-EINFYTKVLPAIEAFQKSR 116
            |...|...|::| :|.|...           :.:..||:  |..| |.|:| |:..::.
 Worm    55 DNDDLPKHVVLK-IPQNTKGCSVVENAGGGVKNVDHSVVERFMHNTECNYY-KLFSSLS------ 111

  Fly   117 QPAPKKPFVEYPRCLASLCDGVNDFIALEDVGPRGYRAPVRQDYIS-LEDALLTMRTLGRFHGVA 180
                :||.......|||               ..|.:|||....:. |||.        :.|.:.
 Worm   112 ----EKPLQIPTTYLAS---------------KAGEKAPVPVIVLEMLEDC--------KLHDLI 149

  Fly   181 LAFNALDSKNFEKAAGSLEETYYGEHTREW-----------YTGFL---------LLAENVATDA 225
            ..||  :.:.|:.....::...:...|.:|           .:|||         .||:|.....
 Worm   150 PGFN--EDQLFKIVDELVKLHIFSLTTEKWKEIVPDESKLAMSGFLQCMVADVGRKLAQNPELGV 212

  Fly   226 VKQIYPNSKYETVAT--NFLQPPLFDDLINLVSTRSKLSVFGHGDCWTPNFLTKYNERGQSEEII 288
            :.....|    |:.|  |:|| .:.|:.||    ..:.||..|||.|.|..|      ...|:.|
 Worm   213 ILSYVEN----TLDTDPNYLQ-KMRDEYIN----EERPSVICHGDLWAPQIL------WDKEDNI 262

  Fly   289 --IIDFQLARCSSLALDLSFFIYSCTSQELREQHYDELLRAYLESAQDLIQDLGGNAESIISWES 351
              |:|:|.....|...||...:.:|||.:.|:.....||..|....:..:::.|...    :|
 Worm   263 AGIVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGLKEKGFKT----TW-- 321

  Fly   352 LQEELK---NFG--------RFGCGMGIESLPMTMMEDDEVADLDGIKENAI 392
            .:||:.   |:.        .|..|....|   .:::.|...|.:.|||:.:
 Worm   322 TREEIDIEYNYSFIYGASRTIFANGFWANS---PVLQTDGKPDPERIKESFV 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG2004	NP_572501.1	EcKL	42..340	CDD:397213	70/312 (22%)
nhr-246	NP_001256661.1	CHK	134..314	CDD:214734	47/204 (23%)