DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hexo2 and Hexa

DIOPT Version :9

Sequence 1:NP_525081.1 Gene:Hexo2 / 31808 FlyBaseID:FBgn0041629 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001004443.1 Gene:Hexa / 300757 RGDID:2792 Length:528 Species:Rattus norvegicus


Alignment Length:547 Identity:178/547 - (32%)
Similarity:263/547 - (48%) Gaps:71/547 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 AIWPMPTGKECTISHRRVRFDP--WKVRFHVVAPGEAATQFLRETNRLFVSNLL------KECIR 148
            |:||.|  :....||||....|  ::.|:|..:..:|....|.|..|.:.|.|.      :....
  Rat    22 ALWPWP--QYIQTSHRRYTLYPNNFQFRYHAGSAAQAGCVVLDEAFRRYRSLLFGSGSWPRPSFS 84

  Fly   149 NCTLETSKQILVRSTVANESLVLDWPTDES---YALVVRTTETATFVDIQATTVYGARHAFETLS 210
            .......|.||:.|.|..|  ..::|..||   |.|.:...:..    :.:.||:||....||.|
  Rat    85 KKQQPLGKNILMVSVVTAE--CNEFPNLESVENYTLTINDDQCL----LSSETVWGALRGLETFS 143

  Fly   211 NLVTGSLSNGLLMVTTANITDRPAFSHRGVLLDTARNFVPLKFIRSTLDAMAASKLNVLHWHVVD 275
            .||..| :.|...:....|||.|.|.|||:||||:|:::||..|.:|||.||.:|.||.|||:||
  Rat   144 QLVWKS-AEGTFFINKTKITDFPRFPHRGILLDTSRHYLPLSSILNTLDVMAYNKFNVFHWHLVD 207

  Fly   276 THSFPLEITRVPEMQRYGAYSS-SQTYSRQDALNLVKYARLRGIRILIEIDGPSHAGNGWQWGPA 339
            ..|||.|....||:.|.|:::. :..|:.||...:::||||||||:|.|.|.|.|.   ..||  
  Rat   208 DSSFPYESFTFPELTRKGSFNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHT---LSWG-- 267

  Fly   340 AGL-GNMSVCLNQSPWRRFCVQPPCGQLNPLNDHMYAVLKEIFEDVAEVGAPEETLHMGGDEVFL 403
            ||: |.::.|.:.|.     :....|.:||..:..|..:...|.:::.| .|:..||:|||||..
  Rat   268 AGVPGLLTPCYSGSR-----LSGTYGPVNPSLNSTYDFMSTFFLEISSV-FPDFYLHLGGDEVDF 326

  Fly   404 PCWNNTDEIRDGMRARGYDLSEQSFLRLWSQFHQRNLNAWDEINERMYPGIKEPKSVIIWSSHLT 468
            .||.:...|:..|:.:|:    ..:.:|.|.:.|..|:...:.:          |..::|.....
  Rat   327 TCWKSNPNIQAFMKKKGF----TDYKQLESFYIQTLLDIVSDYD----------KGYVVWQEVFD 377

  Fly   469 NPRYIETYLPKERFIIQTWVESQDALNRE----LLQRGYRLIVSTKNAWYLDHGFWGSTSYYNWR 529
            |...:     :...|||.|.|.......:    :.|.|:|.::|.  .|||:...:|.    :|:
  Rat   378 NKVKV-----RPDTIIQVWREEMPVQYMKEIEAITQAGFRALLSA--PWYLNRVKYGP----DWK 431

  Fly   530 TVYS------SGMPVGRSKDQVLGGEVCMWSEYVDQNSLESRIWPRAGAAAERMW-SNPKSSALL 587
            .:|.      .|.|.  .|..|:|||.|||.||||..:|..|:||||||.|||:| ||..::...
  Rat   432 EMYKVEPLAFRGTPA--QKALVIGGEACMWGEYVDSTNLVPRLWPRAGAIAERLWSSNLTTNMDF 494

  Fly   588 AQRRFYRYRERLLARGIHADAVIPHWC 614
            |.:|...:|..||.|||.|..:...:|
  Rat   495 AFKRLSHFRCELLRRGIQAQPISVGYC 521

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Hexo2NP_525081.1 Glycohydro_20b2 93..212 CDD:291511 34/129 (26%)
GH20_HexA_HexB-like 235..603 CDD:119332 130/380 (34%)
HexaNP_001004443.1 Glycohydro_20b2 24..145 CDD:291511 34/128 (27%)
GH20_HexA_HexB-like 167..510 CDD:119332 130/380 (34%)