DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hexo2 and Hexa

DIOPT Version :9

Sequence 1:NP_525081.1 Gene:Hexo2 / 31808 FlyBaseID:FBgn0041629 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_034551.2 Gene:Hexa / 15211 MGIID:96073 Length:528 Species:Mus musculus


Alignment Length:552 Identity:182/552 - (32%)
Similarity:265/552 - (48%) Gaps:81/552 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 AIWPMPTGKECTISHRRVRFDP--WKVRFHVVAPGEAATQFLRETNRLFVSNLL-------KECI 147
            |:||.|  :.....|||....|  ::.|:||.:..:|....|.|..|.: .|||       :...
Mouse    22 ALWPWP--QYIQTYHRRYTLYPNNFQFRYHVSSAAQAGCVVLDEAFRRY-RNLLFGSGSWPRPSF 83

  Fly   148 RNCTLETSKQILVRSTVANESLVLDWPTDES---YALVVRTTETATFVDIQATTVYGARHAFETL 209
            .|......|.|||.|.|..|  ..::|..||   |.|.:...:..    :.:.||:||....||.
Mouse    84 SNKQQTLGKNILVVSVVTAE--CNEFPNLESVENYTLTINDDQCL----LASETVWGALRGLETF 142

  Fly   210 SNLVTGSLSNGLLMVTTANITDRPAFSHRGVLLDTARNFVPLKFIRSTLDAMAASKLNVLHWHVV 274
            |.||..| :.|...:....|.|.|.|.||||||||:|:::||..|..|||.||.:|.||.|||:|
Mouse   143 SQLVWKS-AEGTFFINKTKIKDFPRFPHRGVLLDTSRHYLPLSSILDTLDVMAYNKFNVFHWHLV 206

  Fly   275 DTHSFPLEITRVPEMQRYGAYSS-SQTYSRQDALNLVKYARLRGIRILIEIDGPSHAGNGWQWGP 338
            |..|||.|....||:.|.|:::. :..|:.||...:::||||||||:|.|.|.|.|.   ..|||
Mouse   207 DDSSFPYESFTFPELTRKGSFNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHT---LSWGP 268

  Fly   339 AAGLGNMSVCLNQSPWRRFCVQPPCGQLNPLNDHMYAVLKEIFEDVAEVGAPEETLHMGGDEVFL 403
            .|. |.::.|.:.|.     :....|.:||..:..|..:..:|.:::.| .|:..||:|||||..
Mouse   269 GAP-GLLTPCYSGSH-----LSGTFGPVNPSLNSTYDFMSTLFLEISSV-FPDFYLHLGGDEVDF 326

  Fly   404 PCWNNTDEIRDGMRARGYDLSEQSFLRLWSQFHQRNLNAWDEINERMYPGIKEPKSVIIWSSHLT 468
            .||.:...|:..|:.:|:    ..|.:|.|.:.|..|:...:.:          |..::|.....
Mouse   327 TCWKSNPNIQAFMKKKGF----TDFKQLESFYIQTLLDIVSDYD----------KGYVVWQEVFD 377

  Fly   469 NPRYIETYLPKERFIIQTW---------VESQDALNRELLQRGYRLIVSTKNAWYLDHGFWGSTS 524
            |...:     :...|||.|         :|.||     :.:.|:|.::|.  .|||:...:|.  
Mouse   378 NKVKV-----RPDTIIQVWREEMPVEYMLEMQD-----ITRAGFRALLSA--PWYLNRVKYGP-- 428

  Fly   525 YYNWRTVYS------SGMPVGRSKDQVLGGEVCMWSEYVDQNSLESRIWPRAGAAAERMW-SNPK 582
              :|:.:|.      .|.|  ..|..|:|||.|||.||||..:|..|:||||||.|||:| ||..
Mouse   429 --DWKDMYKVEPLAFHGTP--EQKALVIGGEACMWGEYVDSTNLVPRLWPRAGAVAERLWSSNLT 489

  Fly   583 SSALLAQRRFYRYRERLLARGIHADAVIPHWC 614
            ::...|.:|...:|..|:.|||.|..:...:|
Mouse   490 TNIDFAFKRLSHFRCELVRRGIQAQPISVGYC 521

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Hexo2NP_525081.1 Glycohydro_20b2 93..212 CDD:291511 37/130 (28%)
GH20_HexA_HexB-like 235..603 CDD:119332 132/384 (34%)
HexaNP_034551.2 Glycohydro_20b2 24..145 CDD:291511 37/129 (29%)
GH20_HexA_HexB-like 167..510 CDD:119332 132/384 (34%)