DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11294 and PHOX2B

DIOPT Version :10

Sequence 1:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_003915.2 Gene:PHOX2B / 8929 HGNCID:9143 Length:314 Species:Homo sapiens


Alignment Length:149 Identity:58/149 - (38%)
Similarity:86/149 - (57%) Gaps:25/149 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGPFISPLPGDLLTEY--MFGRRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLS 64
            :.|: :.:|..|.|::  :..:|:|||.|||||..||:|||.:|.:|||||::.|||:||:|.|:
Human    75 SSPY-AAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLT 138

  Fly    65 EARVQVWFQNRRAKWRKQARLQLLQDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPPSQTPEN 129
            ||||||||||||||:|||.|                     ...|....:.||::.:....:.::
Human   139 EARVQVWFQNRRAKFRKQER---------------------AAAAAAAAAKNGSSGKKSDSSRDD 182

  Fly   130 LSSASKDSELAEVGN-GPN 147
            .|..:|.::....|. |||
Human   183 ESKEAKSTDPDSTGGPGPN 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 36/51 (71%)
PHOX2BNP_003915.2 Homeodomain 99..155 CDD:459649 39/55 (71%)
polyalanine repeat 241..260
Blue background indicates that the domain is not in the aligned region.

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