DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11294 and HB-1

DIOPT Version :10

Sequence 1:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_174164.2 Gene:HB-1 / 839740 AraportID:AT1G28420 Length:1705 Species:Arabidopsis thaliana


Alignment Length:240 Identity:57/240 - (23%)
Similarity:91/240 - (37%) Gaps:56/240 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GRRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRK--Q 82
            ||.:.:|...  ||.||:.||.::.:..||....|.|::.::.||:.::|:||.:||.|.:|  |
plant    37 GRVKPKRQMK--TPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQ 99

  Fly    83 ARLQLLQDAWRMRCLSLGTPPVMGGGAVQ----GGSGNGATARPPSQTPENLSSASKDS--EL-- 139
            :...:......::..|:...|...|...:    ..||:.:...|.|.:..|.:|.|..|  ||  
plant   100 SNKPVKSSVAAVQSASVNELPAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDE 164

  Fly   140 -------------------------AEVG-----NGPNSG-SFTMMHP-AFQQQHQQQQHQGHQQ 172
                                     |::|     :||..| .|..:.| ||......|:|..|..
plant   165 YETMGKPSYESRLSTMVHRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTPIAMQKHLLHPY 229

  Fly   173 ATDQDKLSKTYTELKLYKAPSHGMELGGMAALSGHSDEGSDGSDS 217
            .:|            ||:...........||.|.|..:..|...|
plant   230 ESD------------LYERHDPRPRRSHAAARSFHEQQSLDDPSS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 18/51 (35%)
HB-1NP_174164.2 Homeodomain 40..96 CDD:459649 19/57 (33%)
DDT 550..605 CDD:460696
HARE-HTH 731..799 CDD:461541
WHIM1 936..975 CDD:464774
WSD 1099..1173 CDD:464775
Blue background indicates that the domain is not in the aligned region.

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