DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11294 and HB21

DIOPT Version :10

Sequence 1:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_179445.1 Gene:HB21 / 816370 AraportID:AT2G18550 Length:220 Species:Arabidopsis thaliana


Alignment Length:80 Identity:21/80 - (26%)
Similarity:40/80 - (50%) Gaps:18/80 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RRRQRRNRTT------------------FTPQQLQELEALFQKTHYPDVFLREEVALRISLSEAR 67
            |||:|::::.                  .:.:|::.||..|:..|..:...::.:|..:.|...:
plant    37 RRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQ 101

  Fly    68 VQVWFQNRRAKWRKQ 82
            |.||||||||:|:.:
plant   102 VAVWFQNRRARWKNK 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 17/69 (25%)
HB21NP_179445.1 HOX 61..114 CDD:197696 16/52 (31%)

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