Protein Alignment CG11294 and oc

DIOPT Version :10

• Sequence 1: NP_572500.1
• Gene: CG11294 / 31807
• FlyBaseID: FBgn0030058
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 89/264 - (33%)
• Similarity: 122/264 - (46%)
• Gaps: 67/264 - (25%)

  Fly     3 GPFISPLPGDL----LTEYMFG--RRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRI 61
            |||  .||..|    .::.|:|  .|:|||.|||||..||..|||||.||.|||:|:||||||:|
  Fly    42 GPF--GLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKI 104

  Fly    62 SLSEARVQVWFQNRRAKWRKQARLQLLQDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPPSQT 126
            :|.|:||||||:|||||.|:|     ||...:...|| .:....|||:....|.:.|.:|..|
  Fly   105 NLPESRVQVWFKNRRAKCRQQ-----LQQQQQSNSLS-SSKNASGGGSGNSCSSSSANSRSNS-- 161

  Fly   127 PENLSSASKDSELAEVGNGPNSGSFTMMHPAFQQQHQQQQHQGHQQATDQDKLSKTYTELKLYKA 191
             .|..|:|.::..:..||..|..|               |.||:.|::.|
  Fly   162 -NNNGSSSNNNTQSSGGNNSNKSS---------------QKQGNSQSSQQ--------------- 195

  Fly   192 PSHGMELGGMAALSGHSDEGSDGSDSEEIDLTSGACIDFSQSSKLQQQQQQQQQQGTQGAAGSAE 256
                   ||     |.|...:..::|.....::.|.:..:||.|.......        :|.:|.
  Fly   196 -------GG-----GSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFL--------SAAAAA 240

  Fly   257 ANGG 260
            |:||
  Fly   241 ASGG 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11294	NP_572500.1	Homeodomain	29..81	CDD:459649	37/51 (73%)
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	40/54 (74%)