Protein Alignment CG11294 and Vsx1

DIOPT Version :10

• Sequence 1: NP_572500.1
• Gene: CG11294 / 31807
• FlyBaseID: FBgn0030058
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 338
• Identity: 85/338 - (25%)
• Similarity: 120/338 - (35%)
• Gaps: 126/338 - (37%)

  Fly    21 RRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARL 85
            :.::|..||.||..||:|||..|::.|||||..||.::::..|:|.|:|||:|||||||||
  Fly   392 KNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRK---- 452

  Fly    86 QLLQDAWRMRCLSLGTPPVMGGGAVQGGSG-NGATARPPSQTPENLSSASKDS------------ 137
              .:..|             |........| .||..|.....||.:..::|:.
  Fly   453 --TEKCW-------------GHSTKMAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWLLGMHK 502

  Fly   138 ---ELAEV----------------------GNGPNS--GSFTMMHPAFQ-------------QQH 162
               |.||:                      |:..||  .||::....|.             ..|
  Fly   503 KSLEAAELLKSDESDRETPTSDDTNTSYSAGSTHNSPISSFSISRLLFDAPPPAAGSAGGKGHHH 567

  Fly   163 QQQQHQGH--------------------QQATDQDKLSKTYTELKLYKAPSHGMELGGMAALSGH 207
            ....|:||                    ||...|.:..:.:..|...:......::.|..:.||.
  Fly   568 HHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQVAGTGSGSGS 632

  Fly   208 SDEGSDGSDSEEIDLTSG--ACIDFSQS------SKLQQQQQQQQQQGTQ--------------- 249
            ......|:.|      :|  |...::|.      .:|||||||||||..|
  Fly   633 GSGSGTGAGS------TGPPAHHPYNQQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQHHHSVHH 691

  Fly   250 -----GAAGSAEA 257
                 .|||.|||
  Fly   692 MHHHNAAAGYAEA 704

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11294	NP_572500.1	Homeodomain	29..81	CDD:459649	29/51 (57%)
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	31/56 (55%)