DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11294 and dsc-1

DIOPT Version :10

Sequence 1:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_510497.1 Gene:dsc-1 / 181599 WormBaseID:WBGene00001096 Length:310 Species:Caenorhabditis elegans


Alignment Length:155 Identity:48/155 - (30%)
Similarity:69/155 - (44%) Gaps:36/155 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQLL 88
            :||.||.||..|...||..|:::||||...::.:|..:.:.|.|:.|||||||||||::...|  
 Worm   180 RRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVWFQNRRAKWRRKEHRQ-- 242

  Fly    89 QDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSELAEVGNGPNSGSFTM 153
            :|..|....|             |||.:...|...:|.|:               :|||:     
 Worm   243 RDRTRNESFS-------------GGSNSFDFACFSAQHPD---------------DGPNA----- 274

  Fly   154 MHP-AFQQQHQQQQHQGHQQATDQD 177
            .|| :|...:|..........|:||
 Worm   275 KHPNSFGIPNQPMSLDQFPMNTEQD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 24/51 (47%)
dsc-1NP_510497.1 Homeodomain 181..237 CDD:459649 27/55 (49%)

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