DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11294 and pax10

DIOPT Version :10

Sequence 1:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_001373372.1 Gene:pax10 / 100192208 ZFINID:ZDB-GENE-081022-10 Length:275 Species:Danio rerio


Alignment Length:203 Identity:62/203 - (30%)
Similarity:95/203 - (46%) Gaps:16/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARL 85
            :|:.:||||:||.:|:..||..|::|||||||.||.:|.:|.|.|||:||||.|||||||::.:|
Zfish    71 KRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKL 135

  Fly    86 Q-LLQDAWRMRCLSLGTP-PVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSELAEVGNGPNS 148
            : ..:......|....|| .......|.....:.::....|::..:||..|..|..:.:.:.|:.
Zfish   136 RNQRRSGSSSSCSQTHTPLSTSFNSPVYHSHHSNSSGSMHSRSDSSLSGYSSLSVFSSMQSLPSQ 200

  Fly   149 GSFT---MMHPAFQQQHQQQQHQGHQQATDQDKLSKTYTELKLYKAPSHGMELGGMAALSGHSDE 210
            .:.|   |:.|:........:           |...:||...|...|:.....|..|.:|.....
Zfish   201 STPTYSCMLPPSPSALPPLSR-----------KFDSSYTSPHLPPPPTASANTGFFAGVSAAGQT 254

  Fly   211 GSDGSDSE 218
            ...|.|.|
Zfish   255 AVQGGDQE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 32/51 (63%)
pax10NP_001373372.1 Homeodomain 76..131 CDD:459649 35/54 (65%)

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