Protein Alignment ldd and yadG

DIOPT Version :10

• Sequence 1: NP_001285513.1
• Gene: ldd / 318066
• FlyBaseID: FBgn0083956
• Length: 1998
• Species: Drosophila melanogaster
• Sequence 2: NP_414669.1
• Gene: yadG / 944833
• ECOCYCID: EG12320
• Length: 308
• Species: Escherichia coli
• Alignment Length: 331
• Identity: 85/331 - (25%)
• Similarity: 143/331 - (43%)
• Gaps: 71/331 - (21%)

  Fly   856 LGASLVNVSKLY-GSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAG- 918
            :...|..:.|.| |...|:..:.|.........|||.|||||||.|.:::..:.::||:|.:.|
E. coli     3 IALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGY 67

  Fly   919 ---------EHQVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEE----IRSEVAQTLQS 970
                     :.|:|:..|:....|..|.:       ||.:...|..|||.    ||||  :.|:.
E. coli    68 DLEKDVVNAKRQLGLVPQEFNFNPFETVQ-------QIVVNQAGYYGVERKEAYIRSE--KYLKQ 123

  Fly   971 LNFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLR-QGRA 1034
            |:.....:..:..||||.:|||.:|.|.:..|.::|||||..|||.:.|:.:|..::.|. :|..
E. coli   124 LDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTT 188

  Fly  1035 VIFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKA-QQ 1098
            :|..||:::||:.|..::.|:::|.::             .|.|::...|.....||::..| :.
E. coli   189 IILTTHYLEEAEMLCRNIGIIQHGELV-------------ENTSMKALLAKLKSETFILDLAPKS 240

  Fly  1099 LLPQTQVTHSGAADYPHSLTINASYAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEFE 1163
            .||:..       .|.:.|...|:.                         :||:.....:...|.
E. coli   241 PLPKLD-------GYQYRLVDTATL-------------------------EVEVLREQGINSVFT 273

  Fly  1164 QLNRNG 1169
            ||:..|
E. coli   274 QLSEQG 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ldd	NP_001285513.1	rim_protein	179..1867	CDD:130324	85/331 (26%)
yadG	NP_414669.1	CcmA	5..233	CDD:440746	72/249 (29%)