DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and ABCA6

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_001327229.1 Gene:ABCA6 / 823931 AraportID:AT3G47770 Length:926 Species:Arabidopsis thaliana


Alignment Length:1014 Identity:222/1014 - (21%)
Similarity:375/1014 - (36%) Gaps:345/1014 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1065 SRDSLQR--------LCTSNYSIRLRCADATGVTFVIQKAQQLLPQTQVTHSGAADYPHSLTIN- 1120
            :|||.||        |.|.|       ..:.|.|.    ::.||..:...:|.:..:..:|..| 
plant   116 NRDSCQRTGSCPVTILVTGN-------NQSLGTTL----SENLLSTSFTVNSSSDLFLRNLAYNV 169

  Fly  1121 ------ASYAEHLTPGAVEFLEL--LQSQVTAGSISDVELTTSSSLEQEFEQLNRNGEDAGPRRP 1177
                  ..|..:..||....|.:  :|.|.|..:|          |...|.|             
plant   170 LSTTSETDYTNYRDPGIYSDLPIFNIQPQCTPATI----------LSLSFRQ------------- 211

  Fly  1178 ASDRSGVVAGPAMITDEPPTAC-KQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFVSYR 1241
                             ||... |:.|.:.|   .:|.||..|           |:....|..:|
plant   212 -----------------PPLEFHKEVRCVQG---LNLWRNNSL-----------EVNDEIFKGFR 245

  Fly  1242 LEDDFDTVLPLSRSLYPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNTSQQSYDWVLNS 1306
            .|                     :||                       .:.|....:|| :|| 
plant   246 KE---------------------NHE-----------------------EIINEVAAAYD-LLN- 264

  Fly  1307 WGEYSERRYGGYGLNGSGATVWYNNKGYHSMMAWLNDLNSELLRT--TMNDSESSILT-LNEP-W 1367
                ::|       |....|:||    |.:....|.|...:.:|.  ::|...::.|. |..| .
plant   265 ----TDR-------NKFNVTIWY----YTTYKGDLQDWRVKYVRVPRSVNMVSNAYLQFLRGPGT 314

  Fly  1368 KLGF------------AELSTSSILRQAGDGSMVFILLIAFGLVVASGSVYLVNERVNGEKLQQR 1420
            |:.|            ..:..:|::   |.....:::|:.|.:::.|    ||.|:....::..:
plant   315 KILFDFVKEMPKQETRLRMDMASLI---GPIFFTWVILLLFPVILTS----LVYEKQQRLRIIMK 372

  Fly  1421 LCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPV-------------------FVDRQQL 1466
            :.|:....||:::..: :|.:....||||::   ||..:                   :::.|..
plant   373 MHGLGDAPYWMISYAY-FLAISTLYIVCLMI---FGSAIGLKFFRFNDYTIQFMFYFLYINLQIS 433

  Fly  1467 VGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLI--------------------VPLV 1511
            :..: :|.|||.|...||           :|.:.:|.:.|:                    |..:
plant   434 IAFL-VSSAFSKAVTASV-----------VAYIYVFGSGLLGAFLFQFLIESLSFPRRWIFVMEL 486

  Fly  1512 TMGIILILGVV-------------GDGPAWDDWR-HALNQAFLIFPIHALGDGFLELCKNYMVAL 1562
            ..|..|..|:.             .||..|.|:| .|:::.|.|..:            .::|||
plant   487 YPGFSLYRGLYEFSQYAFQRNLNGRDGMKWKDFRGSAMDEVFTIIIV------------EWVVAL 539

  Fly  1563 VFRRYDID----SYKHPLASDLLGRHF----TALLLVGVAALIINVLIEWHLLRRLWQRVERLLD 1619
            | ..|.||    |.|...|  .|...|    |..:|                   .:|: ||...
plant   540 V-ATYYIDRVSSSSKDTFA--FLKNPFKLSPTPQML-------------------SFQK-ERSDV 581

  Fly  1620 CTYRRELDKLGQLKLVNIQSIFKSCVDTGEAVRAENLWLAY--RRGH---YAVRNVNFSVQRGEC 1679
            .....:||.:.:.:.|. |.||:...:.|  :..:||...|  |.|:   .||..::.:|..|||
plant   582 SVEMEKLDVIQEKETVK-QLIFERSKNHG--IVCDNLKKVYQGRDGNPPKLAVCGLSLAVPSGEC 643

  Fly  1680 FGLLGKNGAGKSTIFKLLTGQLQP--------------DVGQIYFEQPGISYCPQSNPLDPLLTT 1730
            ||:||.|||||::...::||.::|              |:.::|.   .:..|||.:.|...||.
plant   644 FGMLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDICKDMDKVYI---SMGVCPQHDLLWETLTG 705

  Fly  1731 TECIRFYGRLRGIR--DLDQFLDRVLDTYEL--RPYKDVQVRNLSGGNRRKLTVAVTCCGCTPTV 1791
            .|.:.|||||:.::  ||:|.::..|.:..|  ....|:.....|||.:|:|:||::..|....|
plant   706 KEHLLFYGRLKNLKGHDLNQAVEESLKSVNLFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVV 770

  Fly  1792 LMDEPTSDMDPVTRDMVYATIEQLLLARR--AVVLTSHSVSEIEHLCQRVAVLRAGQVIASDSPQ 1854
            .||||::.:||.:|..::..|::   |::  |::||:||:.|.|.||.|:.:...|::....:|:
plant   771 YMDEPSTGLDPASRINLWTVIKR---AKKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPK 832

  Fly  1855 RLKSEHGGYYAVTCFCGPAQQAILSRSLNQRLPGARDLQHYAHSLRF---LVRVRSPGSLGDAPL 1916
            .||..:||.|.:|....|..:..:...:.:....||.:.|.|.:.:|   ...||          
plant   833 ELKGRYGGSYVLTITTSPEHEKDVETLVQEVSSNARKIYHIAGTQKFEFPKEEVR---------- 887

  Fly  1917 LSELF-------------------AILCDVCVNVARFSL 1936
            :||:|                   ..|.||.:.||:..|
plant   888 ISEVFQAVENAKRNFTVFAWGFADTTLEDVFIKVAKTGL 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468
ABC_subfamily_A 859..1073 CDD:213230 5/15 (33%)
drrA 865..1162 CDD:130256 24/113 (21%)
ABC2_membrane_3 1230..1601 CDD:289468 81/447 (18%)
Mem_trans 1436..>1552 CDD:304621 30/168 (18%)
ABC_subfamily_A 1651..1857 CDD:213230 73/230 (32%)
drrA 1666..1945 CDD:130256 91/313 (29%)
ABCA6NP_001327229.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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