Sequence 1: | NP_001285513.1 | Gene: | CG34120 / 318066 | FlyBaseID: | FBgn0083956 | Length: | 1998 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233707.2 | Gene: | Abca2 / 79248 | RGDID: | 620238 | Length: | 2435 | Species: | Rattus norvegicus |
Alignment Length: | 2236 | Identity: | 494/2236 - (22%) |
---|---|---|---|
Similarity: | 797/2236 - (35%) | Gaps: | 700/2236 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 181 FVKLGV----LLCGHPFPNTDTIPLVNEILESEDFSQANDAEIDAMPTRRRRRYEDLPTDWRPTK 241
Fly 242 YCKRLYRDVTSTNQGKLT-WNTIKPIIQGRILYTPANAMTESVVKFSN----------------- 288
Fly 289 ------ASFEELDRLKQ----LSRAAATILTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDI 343
Fly 344 GEIERVFEYIRTNQLIYDILTTVA----DLMDCVSADRFEAVESVEELHKRAYELNQ----NKLF 400
Fly 401 LAAL---NLEDVGL-KQASYRLHMDTDNTQPTFENRNRFWFPGPADSMVIDLKYHRGFVQLKQMV 461
Fly 462 DLGIIKSKREEAGFAPEEDGPESGRSLSGLFSIKQVENDTPDEDDDDFDLSLEESGDEKAAPKVS 526
Fly 527 ASASDHEATTISPSSLDGVTTEEVRVTTEQTVVSGDPDLLLLKNEDVLKRSKRQGLFDLLGGFGG 591
Fly 592 SGDANKKNKFEVDNMQFYTKQFPYPAFLNDVFKRGLYLAQGVQ-VAYLLGLVVFVALSVRERIWM 655
Fly 656 RESRNSMLMRSMGLKAHSELVAWALMSFLELCVIFALISGVLYSGGILGYTN----WFFMMFYCL 716
Fly 717 SFGLCLISFCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDA----KLSVFESFLVDLSFT 777
Fly 778 TAFAKGWGELIRMELQQEGLTVRHLIQVGPARSE---CAMALLMFLLDLLLYAVI---------- 829
Fly 830 --GLAYQRY-----------KKTDNYSF-------------------------VKVSRSQLDGKL 856
Fly 857 GASLV----NVSKLY--GSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVL 915
Fly 916 LAGEHQV-----------GVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQ 969
Fly 970 SLNFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRA 1034
Fly 1035 VIFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQL 1099
Fly 1100 LPQTQVTHSGAADYP-----------------------HSLTIN-----ASY---AEHLTPGAVE 1133
Fly 1134 FL-ELLQSQVTAGSISDVEL--TT-----------SSSLEQEFEQLNRNGEDAGP---------- 1174
Fly 1175 ------------RRPASDRSGVVAGPAM------ITD-------------EPPTA---------- 1198
Fly 1199 ----------------CKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMW----------- 1236
Fly 1237 -------------------FVSY----------RLEDD--------------------------- 1245
Fly 1246 ---------------------FDTV--------LPLS--------------------------RS 1255
Fly 1256 LYPQTAQFLSHERATSFSEKLYPQLRTSCD--------------HLGECRVFN-------TSQQS 1299
Fly 1300 YDWVLNSWGEYSERRYGGYGLNG-----------------------SGATVWYNNKGYHSMMAWL 1341
Fly 1342 NDLNSELLRTTM-----NDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVA 1401
Fly 1402 SGSVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQL 1466
Fly 1467 VGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPL-VTMGIILI--------LGVV 1522
Fly 1523 GDGPAWDDWRHALNQAFLIFPIHALGDGFLELCKNYMVALVFRRY-DIDSYKHPLASDLLGRHFT 1586
Fly 1587 ALLLVGVAALIINVLIEWHLLRRLWQR-------VERLLDCTYRRELDKLGQLKLVNIQSIFKSC 1644
Fly 1645 VDTGEAVRAENLWLAYRRGH----YAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDV 1705
Fly 1706 GQIYFE-----------QPGISYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTY 1757
Fly 1758 ELRPYKDVQVRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAV 1822
Fly 1823 VLTSHSVSEIEHLCQRVAVLRAGQVIASDSPQRLKSEHGGYYAVTCFCGPAQQA-ILSRSLNQRL 1886
Fly 1887 PGARDLQHYAHSLRFLVRVRSPGSLGDAPLLSELFAILCDV--CVNVARFSLSRCRFETVFERIL 1949
Fly 1950 DSSESNGSNGVHKDQQQQVAKNDLPS 1975 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34120 | NP_001285513.1 | ABC2_membrane_3 | <621..760 | CDD:289468 | 31/143 (22%) |
ABC_subfamily_A | 859..1073 | CDD:213230 | 83/230 (36%) | ||
drrA | 865..1162 | CDD:130256 | 110/354 (31%) | ||
ABC2_membrane_3 | 1230..1601 | CDD:289468 | 111/551 (20%) | ||
Mem_trans | 1436..>1552 | CDD:304621 | 30/124 (24%) | ||
ABC_subfamily_A | 1651..1857 | CDD:213230 | 83/222 (37%) | ||
drrA | 1666..1945 | CDD:130256 | 93/294 (32%) | ||
Abca2 | XP_006233707.2 | rim_protein | 1..2369 | CDD:130324 | 488/2214 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342252 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.650 |