DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and abcg2b

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_001034155.1 Gene:abcg2b / 570453 ZFINID:ZDB-GENE-050517-36 Length:618 Species:Danio rerio


Alignment Length:802 Identity:152/802 - (18%)
Similarity:260/802 - (32%) Gaps:332/802 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   792 LQQEGLTVRHLIQVGPARSECAMALLMFLLDLLLYAVI--------GLAYQRYKKTDNYSFVKVS 848
            |:.:|.|| |:...||               :|.|..|        ||..::..:.|        
Zfish    12 LESDGATV-HVKVPGP---------------ILTYQNIHYCIRESRGLCCKKAPERD-------- 52

  Fly   849 RSQLDGKLGASLVNVSKLYGSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQ-----IR 908
                      .|.|||.:              .:..::.::|..|:||::|:.::.|:     :|
Zfish    53 ----------ILKNVSGI--------------MKTGLNAIMGATGSGKTSLLDVMAGRKDPRGLR 93

  Fly   909 QSSGKVL-----------LAGEHQVGVCWQDNILIPTLTAREHLQLYAQIKIP------PGGSGG 956
              ||:||           |...:.|    ||::|:.|||.||:|.....:::|      ......
Zfish    94 --SGQVLVDNKLVTSDLRLMSAYVV----QDDVLMGTLTVRENLLFSGNLRLPREQFSSADKKKK 152

  Fly   957 VEEIRSEV-----AQTLQSLNFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDA 1016
            ||.|..|:     |.|.....|.:       .:|||.|:|..:.:..|.||:::.||||..|:|:
Zfish   153 VESIIEELGLEDCADTKIGTEFIR-------GVSGGERKRCSIGMELITSPTLLFLDEPTTGLDS 210

  Fly  1017 KARKDIWQLIERL-RQGRAVIFATHFMDEAKY----LSDSLVIMRNGRIIAQHSRDSLQRLCTSN 1076
            .....|..|:.|| |.||.:||:.|   :.:|    |.|.|.:|..|                  
Zfish   211 NTANSIIALLHRLSRGGRTIIFSIH---QPRYSIFRLFDYLTLMHKG------------------ 254

  Fly  1077 YSIRLRCADATGVTFVIQKAQQLLPQTQVTHSG----AADYPHSLTINASYAEHLTPGAVEFLEL 1137
                                       :..::|    |.||..||    .|.........:|.  
Zfish   255 ---------------------------ETVYAGPAGKAIDYFQSL----GYERDAFNNPADFF-- 286

  Fly  1138 LQSQVTAGSISDVELTTSSSLEQEFEQLNRNGE-----------DAGPRRPASDRSGVVAGPAMI 1191
              ..:|.|     |..||...|:...:|.|..:           ..||....|:...  ..|:.:
Zfish   287 --LDITNG-----ETATSMPTEKSLAELYRESQFCTAVDEELKCITGPSDSLSEAKS--KAPSYV 342

  Fly  1192 TDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFVSYRLEDDFDTVLPLSRSL 1256
            |    :...|.:::..:...::.||.:.....:.:..||.| .:..|.|:        :||:   
Zfish   343 T----SFSYQLKVVCWRTGLNVVRNPQTSYAQIAMNILFAL-LIGLVYYQ--------MPLT--- 391

  Fly  1257 YPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNTSQQSYDWVLNSWGEYSERRYGGYGLN 1321
            .|:..|    .|..:|   .:..:.....:|....:|                          :|
Zfish   392 LPEALQ----NRIGAF---FFLIINMVFGNLSAVELF--------------------------IN 423

  Fly  1322 GSGATVWYNNKGYHSMMAWLNDLNSELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQAGDG 1386
            .....|..|:.||:              ||                                   
Zfish   424 ERAIFVHENSGGYY--------------RT----------------------------------- 439

  Fly  1387 SMVFILLIAFGLVVASGSVYLVNERVNGEKLQQRLCGV---SAVTYWLVALVWDYLVMVLGLIVC 1448
                             |||.:: :|..:.|..|:..:   |:::|::           :||...
Zfish   440 -----------------SVYFLS-KVFVDLLPNRIVPILIFSSISYYM-----------MGLNPA 475

  Fly  1449 LVVILMFGMPVFVDRQQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPLVTM 1513
            ....|.|.:.|     .||.:.|:||||..:.           |.|:.|:.:|.   :::|.|.|
Zfish   476 FTSFLCFALTV-----SLVSLAGVSLAFLVSA-----------SVSTFAMANIL---VVLPFVFM 521

  Fly  1514 ----GIILILGVVGDGPAWDDW 1531
                |.::.|..:.:..:|..|
Zfish   522 MVFGGFLVNLNSMLNWLSWLKW 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468
ABC_subfamily_A 859..1073 CDD:213230 64/245 (26%)
drrA 865..1162 CDD:130256 74/332 (22%)
ABC2_membrane_3 1230..1601 CDD:289468 50/309 (16%)
Mem_trans 1436..>1552 CDD:304621 23/100 (23%)
ABC_subfamily_A 1651..1857 CDD:213230
drrA 1666..1945 CDD:130256
abcg2bNP_001034155.1 P-loop_NTPase 39..260 CDD:304359 67/313 (21%)
3a01204 41..616 CDD:273361 142/757 (19%)
ABC2_membrane 354..557 CDD:279410 53/332 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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