Sequence 1: | NP_001285513.1 | Gene: | CG34120 / 318066 | FlyBaseID: | FBgn0083956 | Length: | 1998 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296394.1 | Gene: | abca1a / 558924 | ZFINID: | ZDB-GENE-031006-12 | Length: | 2268 | Species: | Danio rerio |
Alignment Length: | 2494 | Identity: | 551/2494 - (22%) |
---|---|---|---|
Similarity: | 929/2494 - (37%) | Gaps: | 781/2494 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLRKDLLVRWRQKGLSLILLAWPVMVFMLLYLIRLKYGSEELEACQYPTRLLPTKNQVVPAAFSY 77
Fly 78 ICSIENRC-----------------------------------QPAHPYE--------------- 92
Fly 93 -------EYSHWKEA-----------PLHSVIDVVNAFVTDERLHKAVVELAEKANFVSAITTLI 139
Fly 140 TSDRFDIIRSNISEIISLVPEIERRMNYSFDIKHLFSNRETFVKLGVLLCGHP-----------F 193
Fly 194 PNTDTIPLVNEILESE-----DFSQANDA----------EIDAMPTRRRRRYEDL---------- 233
Fly 234 ------------------------------------------PTDWRP--------TKYCKRLYR 248
Fly 249 DVTSTNQGKLTWNTIKPIIQGRILYTPANAMTESVVKFSNASFEELDRLKQL------------- 300
Fly 301 ----SRAAATILTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVF----EYIRTNQ 357
Fly 358 LIY----------DILTTVADLMDCVSADRFEAVESVEELHKRAYELNQNKLFLAAL-------N 405
Fly 406 LEDVGLKQASYRLHMDTDNTQPTFENRNRFWFPGPADSMVIDLKY-HRGFVQLKQMVDLGIIKSK 469
Fly 470 REEAGFAPEEDGPESGRSLSGLFSIKQVENDTPDEDDDDFDLSLEESGDEKAAPKVSASASDHEA 534
Fly 535 TTISPSSLDGVTTEEVRVTTEQTVVSGDPDLLLLKNEDVLKRSKRQGLFDLLGGFGGSGDANKKN 599
Fly 600 KFEVDNMQFYTKQFPYPAFLNDVFKRGLYLAQGVQVAYLLGLVVFVALSVRERIWMRESRNSMLM 664
Fly 665 RSMGLKAHSELVAWALMSFLELCVIFALISGVLYSGGILGYTNWFFMMFYCLSFGLCLISFCYMC 729
Fly 730 TNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLSVFESFLVDLSFTTAFAKG----------- 783
Fly 784 ----WGELIRMELQQEGLTVRHLIQVGPARSECAMALLMFLLDLLLYAVI------------GLA 832
Fly 833 YQRY---------------------KKTDNYSFVKVSRSQLDGKLGASLVNVSKLYGS-KCAVSN 875
Fly 876 LSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGE----------HQVGVCWQDNI 930
Fly 931 LIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLCVA 995
Fly 996 IAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRI 1060
Fly 1061 IAQHSRDSLQRLCTSNYSIRLRCAD--------ATGVTFVIQKAQQLLPQTQVTHSGA------- 1110
Fly 1111 ---------------------------ADYPHSLTINASYAEHLTPGA-VEFLELLQSQVTAGSI 1147
Fly 1148 SDVELTTSSSLEQEFEQLNRNGEDAGPRRPASDRSGVVAGPAM----------------ITD--- 1193
Fly 1194 -------EPPT----------------------ACKQFRLLMGKRLRHLSRNYRLLLYVLLLPAL 1229
Fly 1230 FELCAMWFVSYRLEDDFDTVLP---------LSRSLYPQTAQFLSHE------------------ 1267
Fly 1268 ---------------------------RATSFSEKLY-----------PQLRTSCD----HLGEC 1290
Fly 1291 ------------------RVFNTSQQSY-DWVLNSWGE-----------YSERRYGGYGLN---- 1321
Fly 1322 --------------------------------GSGAT------------VWYNNKGYHSMMAWLN 1342
Fly 1343 DLNSELLRTT----MNDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVASG 1403
Fly 1404 SVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVG 1468
Fly 1469 IIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPL---VTMGIILILGVVGDGPAWDD 1530
Fly 1531 WRHALNQAFLIFPIHALGDGFLELCKNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAA 1595
Fly 1596 LIINVLIEWHL---LRRLWQRVERL--LDCTYRRELDKL----GQLKLVNIQSIFKSCVDTGEAV 1651
Fly 1652 RAENLWLAYRRGHY-AVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFE---- 1711
Fly 1712 -------QPGISYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPYKDVQV 1767
Fly 1768 RNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVSEI 1832
Fly 1833 EHLCQRVAVLRAGQVIASDSPQRLKSEHG-GYYAVTCFCG--PAQQAILSRSLNQRLPGARDLQH 1894
Fly 1895 YAHSLRFLVRVRSPGSLGDAPLLSELFAILC--DVCVNVARFSLSRCRFETVFERILDSSESNGS 1957
Fly 1958 NGVHKDQQQQVAKNDLP-SKSPAV 1980 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34120 | NP_001285513.1 | ABC2_membrane_3 | <621..760 | CDD:289468 | 32/138 (23%) |
ABC_subfamily_A | 859..1073 | CDD:213230 | 88/224 (39%) | ||
drrA | 865..1162 | CDD:130256 | 110/350 (31%) | ||
ABC2_membrane_3 | 1230..1601 | CDD:289468 | 107/524 (20%) | ||
Mem_trans | 1436..>1552 | CDD:304621 | 27/118 (23%) | ||
ABC_subfamily_A | 1651..1857 | CDD:213230 | 78/219 (36%) | ||
drrA | 1666..1945 | CDD:130256 | 95/296 (32%) | ||
abca1a | NP_001296394.1 | rim_protein | 1..2233 | CDD:130324 | 547/2477 (22%) |
ABC_subfamily_A | 904..1122 | CDD:213230 | 87/222 (39%) | ||
ABC_subfamily_A | 1919..2139 | CDD:213230 | 79/235 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 159 | 1.000 | Domainoid score | I4043 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |