Protein Alignment ldd and abch1

DIOPT Version :10

• Sequence 1: NP_001285513.1
• Gene: ldd / 318066
• FlyBaseID: FBgn0083956
• Length: 1998
• Species: Drosophila melanogaster
• Sequence 2: XP_687003.5
• Gene: abch1 / 558667
• ZFINID: ZDB-GENE-050517-42
• Length: 713
• Species: Danio rerio
• Alignment Length: 768
• Identity: 160/768 - (20%)
• Similarity: 280/768 - (36%)
• Gaps: 259/768 - (33%)

  Fly   862 NVSKLYGSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGE------H 920
            :|.:.||....::||:|...:.|:..|||.:|.||:||:|.:.|.::.|.|.:.:.|:      |
Zfish    43 DVCRSYGKLKVLNNLNLTLPQGQIYGLLGPSGCGKTTLLKCIVGTLKISRGHITVLGKPPAFPGH 107

  Fly   921 Q-----VGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKHESYP 980
            :     ||...||..|....|....|..:.:|.   |.|.  :|..:.::..:..|:..:..|..
Zfish   108 EVPGKMVGYMPQDIALYNEFTISNTLWFFGRIH---GLSS--KETEARMSFLIDFLDLPQKHSLV 167

  Fly   981 SWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQ-LIERLRQGR-AVIFATHFMD 1043
            . .||||.|||:.:..|.:.:|.::|||||..|||...|..||| |:|.:|.|: ::|..||:::
Zfish   168 K-NLSGGQRRRVSLGAALLQNPKLLILDEPTVGVDPVLRAKIWQHLVEIVRGGQVSIIITTHYIE 231

  Fly  1044 EAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQLLPQTQVTHS 1108
            ||:. ::::.:|||||::|:...|::.:
Zfish   232 EARQ-ANTVGLMRNGRLLAEGPPDAVMK------------------------------------- 258

  Fly  1109 GAADYPHSLTINASYAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEFEQLNRNGEDAG 1173
                            :|                           .:::||..|.||..:.:.:|
Zfish   259 ----------------QH---------------------------NAATLETAFLQLCEDSDQSG 280

  Fly  1174 PRR----------PASD-RSGVVAGPAM--ITDEPPTACK---------------QFRLLMGKRL 1210
            |::          |:.| ....:..|.:  .|.|....||               ....||.|.:
Zfish   281 PKQSPQGRLLDSSPSPDSMRDEIREPILRKSTSEEMPKCKADWKVRARHIIPKWSNIAALMIKTM 345

  Fly  1211 RHLSRNYRLLLYVLLLPALFELCAMWF--------VSYRLEDDFDTVLPLSRSLYPQTAQFLSHE 1267
            ..:.|....|.:..|||.: ::|.|..        :...:.::..:....||||    ..||.:
Zfish   346 VRMRRLPGSLCFQFLLPVI-QICLMCLCIGGDPKNIDVAVVNNESSPSAFSRSL----LSFLDN- 404

  Fly  1268 RATSFSEKLYPQLRTSCDHLGECRVFNTSQQSYDWVLNS--WG--EYSER------------RYG 1316
              ||.::       .|..|          ..::|.:.|.  ||  |:.|.            |..
Zfish   405 --TSINQ-------VSLSH----------SDAFDGIRNGEYWGVIEFGENFTSYLTKRMLQPRVS 450

  Fly  1317 GYGLNGSGATVWYNNKGYHSMMAWLNDLNSELLRTTMNDSESSILTLNEPWKLGFAELSTSSILR 1381
            ...:.|.            |:.|||:..|.::           .|.|.:.....|.......:
Zfish   451 REVVEGG------------SVHAWLDLTNRQI-----------ALMLQKKLHQAFEAFMEKRL-- 490

  Fly  1382 QAGDGSMVF----------------------------ILLIAFGLVVASGSVYLVNERVNGEKLQ 1418
                |||.:                            :|.|.|.|.|...::..|.||..|...:
Zfish   491 ----GSMSYMVAVPIKFEEPIYGSKNTDFTTFVTPGAVLSITFYLAVGLTALSFVLERKEGLLDR 551

  Fly  1419 QRLCGVSAVTYWLVALVWDYLVMVLGLIVCLV-VILMFGMP------VFVDRQQLVGIIGLSLAF 1476
            ..:.|||::...|..|.....|:.:.:|:.|: .:|:|.:|      :.:....|.|:.|:
Zfish   552 CWVAGVSSLETMLAHLFSQLFVISVQIILLLIFTLLVFNIPNEGSLALVISLIVLQGVTGI---- 612

  Fly  1477 SFACVPSVHVAEKIFSDSSIAIVSIFCANLIV------------PLVTMGIIL 1517
            ||..|.|..:.::  ..::.|.:.:|..|||:            ||..:.::|
Zfish   613 SFGLVISSAIDDE--QSANQAALGVFYPNLILSGVIWPVECIPYPLRYLSLVL 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ldd	NP_001285513.1	rim_protein	179..1867	CDD:130324	160/768 (21%)
abch1	XP_687003.5	None