DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34120 and abca12

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:XP_686632.6 Gene:abca12 / 558335 ZFINID:ZDB-GENE-030131-9790 Length:5913 Species:Danio rerio


Alignment Length:2202 Identity:516/2202 - (23%)
Similarity:898/2202 - (40%) Gaps:563/2202 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LEACQYPTRLLPTKNQVVPAA---FSYICSIENRCQPAHPYEEYSHWKEAPLHSVIDVVNAFVTD 115
            |:.|..|:.|     |:.||.   ||..|.:.:            .|      ..|.::  |:..
Zfish  3936 LQQCSDPSSL-----QLDPAGQAMFSAFCDLSD------------DW------YTISIL--FLRH 3975

  Fly   116 ERLHKAVVELAEKANFVSAITTLITSDRFDIIRSNISEIISLVPEIERRMNYSFDIKHL------ 174
            ......:..|....:....:.|::     ::::...:.:..|||.|.:...|..:|..|      
Zfish  3976 MDTKAILFRLMLSQDIQDLVATML-----EMVKFLTNMMNKLVPAINKLQEYLTNIGQLNLVANQ 4035

  Fly   175 ------------FSNRETFVKLGVLLCGHPFPNTDTIPLVNEILESEDFSQANDAEIDAMPTRRR 227
                        .|::.||..|...||.:.......|..| .|:.:.|.|..:|.:.:.:..:.:
Zfish  4036 EFHGLVRGKRSTISSKATFNTLSRALCKNGILTLFAITKV-PIVTAADPSVQSDHKREELIEKFK 4099

  Fly   228 RRYEDLPTDWRPTKYCKRLYRDVTSTNQGKLTWNTIKPIIQGRILYTPANAMTESVVKFSNASFE 292
                 :|.|..|  :|..|:.|:.:|..|.:.|..:||::.|:|||:|...||..:::.||:|..
Zfish  4100 -----IPHDASP--FCMSLFLDMVNTTGGAVAWAFLKPMLLGQILYSPDTPMTREIMRKSNSSLH 4157

  Fly   293 ELDRLKQLSR----------AAATILTKLHTNATFQEAFDNLLKLAKSPLVKSLV---------G 338
            :...||..:.          .:|.|||         :....|.....||.|::.:         |
Zfish  4158 QFGDLKLYASEWIESSSYVLQSANILT---------QTLPILKNSLNSPFVQNFIRTQTGIDVSG 4213

  Fly   339 DDFDIGEIERVFEYIRTNQLIYDILTTVADLM----DCVSADRFEAVESVEELHKRAYELNQNKL 399
            ....:.:...:...:..|:.|.|.:||::.||    .||:.||:....|.:||.|:|.:|.||:.
Zfish  4214 MSATLNQFSNMTVLLEKNKFIMDQITTLSVLMMNLSSCVNFDRYRGFNSTDELDKQAEKLAQNRE 4278

  Fly   400 FLAAL--------------NLEDVGLKQASYRLHMDTDNTQPTFENRNRFWFPGPADSMVIDLKY 450
            ..|::              |::        |.:.|:.:|...|...||.||......|.....:|
Zfish  4279 LYASIIFKLPKENSSSLPPNID--------YTIRMNIENVMRTDRARNPFWVKDAYISATRTQRY 4335

  Fly   451 HRGFVQLKQMVDLGIIKSKREEAGFAPEEDGPESGRSLSGLFSIKQVENDTPDEDDDDFDLSLEE 515
            .||||.|::.::..||:.              ::|.::.|                         
Zfish  4336 SRGFVYLQESIERAIIEM--------------QTGNAMDG------------------------- 4361

  Fly   516 SGDEKAAPKVSASASDHEATTISPSSLDGVTTEEVRVTTEQTVVSGDPDLLLLKNEDVLKRSKRQ 580
                   |.|...|                                                   
Zfish  4362 -------PAVQMQA--------------------------------------------------- 4368

  Fly   581 GLFDLLGGFGGSGDANKKNKFEVDNMQFYTKQFPYPAFLNDVFKRGLYLAQGVQVAYLLGLVVFV 645
                                            ||||.:..|.:...:..|  ..:|.::..|:|:
Zfish  4369 --------------------------------FPYPCYYKDEYLNSIAFA--FPMALMISWVLFI 4399

  Fly   646 ALSVRERIWMRESRNSMLMRSMGLKAHSELVAWALMSFLELCVIFALISGVLYSGGILGYTNWFF 710
            |..|::.:..||.|....|:.||:...|...||.:.|...|.|...:::.:|.:||||..::.|.
Zfish  4400 AHFVKKLVHERELRLHEYMKMMGVNPISHFFAWLIESGAFLLVTVIILTIILKAGGILPRSDGFV 4464

  Fly   711 MMFYCLSFGLCLISFCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLSVFESFLVDLS 775
            :..|...:|..:::..::.::||:..||..::.:|::.||..|||:::..:..||......:.|.
Zfish  4465 LFLYLCDYGFSVLAVSFLVSSFFDKTNIAGLSGSLIYVISFFPFIVLIHLEDNLSFSVKSALSLF 4529

  Fly   776 FTTAFAKGWGELIRMELQQEGLTVRHLIQVGPA---RSECAMALLMFLLDLLLYAVIGLAYQRYK 837
            ..|.|:.....:.|.|.|:||:...:: .:.|.   .|.......:.|:|.|:|.:||: |.|..
Zfish  4530 SPTCFSYASQYIARYEKQEEGIQWSNM-YISPLAGDTSSFGWLCWLLLIDSLVYFIIGI-YIRMV 4592

  Fly   838 KTDNYSFV------------------------KVSRSQL--------------DGK--------- 855
            ....|...                        |:.|..|              .||         
Zfish  4593 FPGKYGIAVPWYFPVTKSFWTDMFSCCSKTPKKIGRGLLFTNMMQDQSSMNKSKGKGSLVAKGEE 4657

  Fly   856 ------LGASLVNVSKLYGSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKV 914
                  :|.||..::|.||.:.||.||:|.|....|:.|||.|||||:|.:.||||....:.|.:
Zfish  4658 DFSGLPVGVSLYGLTKTYGKRNAVDNLNLSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTVGTI 4722

  Fly   915 LLAG----------EHQVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQ 969
            .:.|          ..::|||.|.::|...||.:|||.||||||.|....   :|::.:|.:.|.
Zfish  4723 EVYGMDMQMFIDDVRKEMGVCMQYDVLFDHLTTKEHLLLYAQIKAPHWTK---QEVKEQVHKILM 4784

  Fly   970 SLNFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRA 1034
            ..:...|.......||||.:|:|.::||||....:|:||||..|||..:|:.||.:|.:.:|.|.
Zfish  4785 ETDMHAHRHKRVGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIIIQHKQERT 4849

  Fly  1035 VIFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQL 1099
            :|.:||.:|||:.|||.:..:..|.:          :.|.|.:.::.:.|....:| :.:|.:..
Zfish  4850 IILSTHHLDEAEVLSDRIAFLERGGL----------KCCGSPFYLKDKLAKGYNLT-LTKKVETA 4903

  Fly  1100 LPQTQVTHSGAADYPHSLTINASYAEH-----------LTP-GAVEFLELLQS--------QVTA 1144
            ..:.:..:....|:.||...:|...:.           .|| .|.|:..||.|        .:..
Zfish  4904 DSKEKFDYEKLRDFIHSHLPDARQKDREMGDLVYALPPYTPQNASEYHSLLNSLDQNLDKLHLGC 4968

  Fly  1145 GSISDVELTTSSSLEQEFEQLNRNGEDAGPRRP---------------------ASDRSGVVAG- 1187
            ..|||      ::||:.|.||.|  :|..|:..                     :.|.:.:..| 
Zfish  4969 YGISD------TTLEEVFLQLTR--DDLEPKESETWSVSESVIENDMFASRDSLSEDCNSMYLGE 5025

  Fly  1188 PAMITDEPPTACKQFRL-------LMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFVSYRLEDD 1245
            .|.:|..  :..:.|.|       ::.||:.|..|:::.|...:|||.||.:.||...|.:.:..
Zfish  5026 KASLTGN--STVRGFALGVQRVIAMLLKRVHHSRRDWKGLFSQVLLPVLFVIAAMGLGSIKSDLQ 5088

  Fly  1246 FDTVLPLSRSLYPQTAQFLSHERATSFSEKL------YPQLRTSCDHL----------------- 1287
            ....:.||.:||....|:.........:.:|      ||.:    ||:                 
Zfish  5089 HFPEIVLSPALYHVDEQYAFFSNQNPNTSRLVDTMMSYPGI----DHVCMTDPTDPVCKGRPSTG 5149

  Fly  1288 --------------GECRVFNTSQ----QSYD----------------------WVLNSWGEYSE 1312
                          ..|:..|..|    |.||                      ::|.:...:..
Zfish  5150 SQTWVSGGNSSATFTTCKCSNQVQSCPAQGYDPPRKRCPSSQIVYNLTGVNIENYLLATANNFIR 5214

  Fly  1313 RRYGGYGL-----------------NGSGATVWYNNKGYHSMMAWLNDLNSELLRTTMNDSES-- 1358
            .||||:..                 |.:.:.||||::|:|||.|:||.||:..||:::...:.  
Zfish  5215 DRYGGWEFGKPLPIDLKMDMLDVPANRTLSKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPEKRYQ 5279

  Fly  1359 ---SILTLNEPWKLGFAELSTSSILRQAGDGSMVFIL-----LIAFGLVVASGSVYLVNERVNGE 1415
               ||.:...|.::...:|..         |.:|.||     |..:.::.||..:|.|.|...|.
Zfish  5280 YAISISSHPYPGQVQDEDLMV---------GGLVSILVALCVLTGYSIMTASFVIYEVQEHHTGS 5335

  Fly  1416 KLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVGIIGLSLAFSFAC 1480
            |..|::.|:|...||::...:|..:.::.:::.:|::..|.:|.|.:||.|..:..|.:.|.|:.
Zfish  5336 KRLQQISGISEPFYWIINFFYDMALYMIPVVLSVVMVAAFQLPAFTERQNLAAVTLLLVLFGFST 5400

  Fly  1481 VPSVHVAEKIFSDSSIAIVSIFCANLIV---PLVTMGIILILGVVG-DGPAWDDWRHALNQAFLI 1541
            .|.:::...:|.|:.:|.:...|.||.:   .:::..||..||.:. :..:..:....::..||:
Zfish  5401 FPWMYLLSAMFKDTEMAFIGYVCINLFISVNTIISTSIIYFLGQLNQNDQSIQNIYQTMSNIFLV 5465

  Fly  1542 FPIHALGDGFLELCKNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAALIINVLIEWHL 1606
            ||..:.|:|.:||.:..|...:...:.:|:||:|.:.|:||..|.::.|.|.....:.:|:...|
Zfish  5466 FPQFSFGNGLMELARVDMQVQILSGFGVDAYKNPFSMDVLGWMFISMFLQGFICFTLRLLLNKTL 5530

  Fly  1607 LRRL-----WQR----------VERLLDCTYRRELDKLGQ-------LKLVNIQSIFKSCVDTGE 1649
            ||::     |:|          .|.:||     |..::|:       |::.::..::::      
Zfish  5531 LRKVRRLFCWKRNAVQSYSPNEDEDVLD-----ERLRVGRGDASSDILQVNHLTKVYQN------ 5584

  Fly  1650 AVRAENLWLAYRRGHYAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYF---- 1710
                      :.:...||::::..:..||||||||.|||||:|.||:|||.:.|..|....    
Zfish  5585 ----------FSKRVQAVKSLSVGIPAGECFGLLGVNGAGKTTTFKMLTGDISPSGGSAKIRDID 5639

  Fly  1711 -----------EQPGISYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPY 1762
                       |...|.||||.:.||.|||..|.:.||.|:|||  ||:.|.::.:|...:|..:
Zfish  5640 GRMVDIIDCRREGINIGYCPQVDALDDLLTGEEHLYFYARIRGISKRDISQVVNYLLKKLQLNYH 5704

  Fly  1763 KDVQVRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSH 1827
            ::....:.|.|.||||:.|:...|....:|:|||:|.|||.::..::..|.:.::.:.|||||||
Zfish  5705 RNNTSESYSCGTRRKLSTALALIGNPQILLLDEPSSGMDPRSKRHLWKIISEQVMGKCAVVLTSH 5769

  Fly  1828 SVSEIEHLCQRVAVLRAGQVIASDSPQRLKSEHGGYYAVTCFCGPAQQAI--LSRSLNQRLPGAR 1890
            |:.|.|.||.|:|::..||.....|.|.:|:..|..:.|..:...|...:  :|..:.|..||..
Zfish  5770 SMEECEALCTRLAIMVKGQFRCLGSLQHIKNRFGSGFTVKMYLTGASYDVDMISNFMQQNFPGTC 5834

  Fly  1891 DLQHYAHSLRFLVRVRSPGSLGDAPLLSELFAIL--CDVCVNVARFSLSRCRFETVF 1945
            ...::::.:.:.|.| :||.      ::.:|::|  ....:.:..||:|:...:.||
Zfish  5835 LKDNHSNMVEYHVPV-APGG------VASIFSLLESNKTVLQIKHFSVSQTTLDEVF 5884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 37/138 (27%)
ABC_subfamily_A 859..1073 CDD:213230 82/223 (37%)
drrA 865..1162 CDD:130256 101/326 (31%)
ABC2_membrane_3 1230..1601 CDD:289468 103/464 (22%)
Mem_trans 1436..>1552 CDD:304621 28/119 (24%)
ABC_subfamily_A 1651..1857 CDD:213230 81/222 (36%)
drrA 1666..1945 CDD:130256 98/299 (33%)
abca12XP_686632.6 ABC2_membrane_3 4268..4588 CDD:289468 88/460 (19%)
CcmA 4666..4941 CDD:224054 91/288 (32%)
ABC_subfamily_A 4666..4885 CDD:213230 84/231 (36%)
ABC2_membrane_3 <5245..5493 CDD:289468 67/256 (26%)
CcmA 5572..5886 CDD:224054 101/336 (30%)
ABC_subfamily_A 5573..5799 CDD:213230 82/241 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I5008
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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