DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and Abca14

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:XP_038957098.1 Gene:Abca14 / 365362 RGDID:1561491 Length:1691 Species:Rattus norvegicus


Alignment Length:1698 Identity:404/1698 - (23%)
Similarity:712/1698 - (41%) Gaps:375/1698 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 SLEES------GDEKAAPKVSASASDHEATTISPSSLDGVTTEEVRVTTEQTVVSG---DPDLLL 567
            |.|||      .::||...::|...||:..|         :.|.:.:..:.::..|   ||    
  Rat   119 SSEESFEKYIKYEDKAEHVLAAIVFDHKFKT---------SNEPLPLQVKYSLRFGRMYDP---- 170

  Fly   568 LKNEDVLKRSKRQ-----------------GLFDLLGGFGGSGDANKKN----KFEVD------- 604
               |:|||.|:||                 |..::|...||:....::.    :..||       
  Rat   171 ---ENVLKPSERQKETEWNTSILFPSVPSLGPRNVLENDGGNPGYIREGFLLVQHSVDKAIMMHH 232

  Fly   605 ----------NMQFYTKQFPYPAFLNDVFKRGLY----------LAQGVQVAYLLGLVVFVALSV 649
                      |...|.::||||||::|.|   |:          |....|:|  |.::..:.|..
  Rat   233 SGRAAEAMFANTTIYARRFPYPAFIHDNF---LWTFIVMFPWTILFTFTQMA--LDIIGTIMLEK 292

  Fly   650 RERI----WMRESRNSMLMRSMGLKAHSELVAWALMSFLELCVIFALISGVLY----SGGILGYT 706
            .:|:    .|....|:||..|.       .:.:.||.|:.:|    |:.|:|:    ...:..::
  Rat   293 EKRLKEYQLMVGLSNAMLWVSY-------FITFLLMYFIIIC----LLCGILFLKITHERVFQHS 346

  Fly   707 NWFFMMFYCLSFGLCLISFCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLSVFESFL 771
            :..|:.||.|.|.:..:...:|.:.|||.|::....:..|.|::..|::||.....:.|:.....
  Rat   347 DPLFIAFYFLCFAISSMLLGFMISTFFNRASLATSIAGFLHFLTFFPYLIVFSLYDQTSLSGKLA 411

  Fly   772 VDLSFTTAFAKGWGELIRMELQQEG---------------LTVRHLIQVGPARSECAMALLMFLL 821
            :.|...||.|.|...:.::|::..|               ||:.|:|.             |||.
  Rat   412 LCLITNTALAFGTDLICKLEMKGHGAQWYNFATKVNPDDDLTLAHIIG-------------MFLF 463

  Fly   822 DLLLYAVIGLAYQ-----RY----------KKTDNYSFVKVSRSQ----------------LDGK 855
            ...||.::.....     :|          :||..:....:||.:                :|.:
  Rat   464 SAFLYGLVAWYVDAVFPGKYGVPKPWNFFLQKTYWFGEPALSREESQVSDLPPSDFMEPEPVDLE 528

  Fly   856 LGASLVNVSKLYGSK----CAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLL 916
            .|..:.::.|.:..|    .||.:|||:....|::.|||.|||||:|.:.:|||....:.|||.:
  Rat   529 AGIQIQHLYKEFTLKNSTLMAVKDLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTKGKVYI 593

  Fly   917 AG----------EHQVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSL 971
            :|          ...:|:|.||::|.|.||..|||..|..||    |.......| |:.:.|.|.
  Rat   594 SGYDISSDMVQVRKSLGLCPQDDLLFPLLTVSEHLYFYCVIK----GISSTNRPR-EIHRMLTSF 653

  Fly   972 NFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVI 1036
            ...:..:..|..||||.:|:|.:.||.|....|||||||.:|:|..:|:.||.|::..::.|.::
  Rat   654 GLLQKSNTMSKDLSGGMKRKLSIIIALIGDTKVVILDEPTSGMDPVSRRAIWDLLQHYKKDRTIL 718

  Fly  1037 FATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKA----- 1096
            ..||.||||..|.|.:.|:..|          :.:.|.|  |:.|:.....|...||.|.     
  Rat   719 LTTHHMDEADVLGDRIAILVMG----------VLKCCGS--SLFLKKLYGVGYHLVIVKTPDSDD 771

  Fly  1097 -------QQLLPQTQVTHSGAADYPHSLTINASYAEHLTPGAVEFLELLQSQVTAG--------- 1145
                   :..:|..::..:.||:....|.     .||....|..|.:|.:.|...|         
  Rat   772 GKISQLIKNYIPTAEMETNVAAELSFILP-----KEHTHRFAELFTDLEERQEELGISGFGVSMT 831

  Fly  1146 ----------SISDVEL---------TTSSSLEQEFEQLN--RNGEDAGPRRPASDRSGVVAGPA 1189
                      :::|::|         |.:.|..:..|.:|  ||.|.:|.....||.|.....|.
  Rat   832 TMDEVFFKVSNLADLKLNTEIAQSASTVNPSTSENNENMNVPRNFERSGYSGRYSDSSFNAGWPL 896

  Fly  1190 MITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFVSYR------------- 1241
            .:        :|||.:..||:....||::|||..||     .|..:.:|..:             
  Rat   897 YM--------QQFRAMFIKRVMFSWRNWKLLLLQLL-----ALQGLTYVLIKGIGFSVPKEPARV 948

  Fly  1242 --LEDDFDTVLPLSRSLYPQTAQFLSHERATSFSEK----------LYPQLRTSCDHLGECRV-F 1293
              ||...:|.:|.|.|..|...|.|:........:|          :...|.|:.|.:..|.| |
  Rat   949 MDLEQYGETTVPFSVSGDPPLTQKLTKNLEIMLKDKKQKVHEVQGGVQDYLLTNKDCIYSCIVAF 1013

  Fly  1294 NTSQQSYDWVLNSWGEYSERRYGGYGLNGSGATVWYNNKGYHSMMAWLNDLNSELLRTTMNDSES 1358
            :.....           .|:.:          |.|:||:.||:....|:.|::.:.: .::..::
  Rat  1014 SLDVTR-----------KEKTF----------TFWFNNEAYHASPLSLSILDNIIFK-YLSGPDA 1056

  Fly  1359 SILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVASGSVYLVNERVNGEKLQQRLCG 1423
            :|...|:|....|.:..:..  |.|....:||.||....:..:...:..|.|||:..|..|.:.|
  Rat  1057 TITVSNKPQPQPFTKGRSEE--RSASGIQIVFNLLFGMSIFTSGFCLMTVTERVSKAKHIQFVSG 1119

  Fly  1424 VSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVGIIGLSLAFSFACVPSVHVAE 1488
            |..:.:||.||:||.::..:..::.|:|.|...:.:.::....:..:.:.:.|.::.:|.:::..
  Rat  1120 VYTLNFWLSALLWDLIIHFVACVLLLLVFLYTDVHILLENYNFLDTMLILMLFGWSIIPFIYLLS 1184

  Fly  1489 KIFSDSSIAIVSIFCANLIVPLVTMGIILILGVVGDGPAWDDWRHALNQAFLIFPIHALGDGFLE 1553
            ..:::|:.|.:.||..|..:..:::.:..::.::.|  .....::.:..:.|:.||:..|     
  Rat  1185 FWYNNSTNAYIKIFVFNHCLGFMSIIVDAVVELIPD--IKTSTKNLILNSLLLLPIYNFG----- 1242

  Fly  1554 LCKNYMVALVFRRYDIDSYKHPLASDL----------------------LGRHFTALLLVGVAAL 1596
                   ..:|:.|.|...: .|.|.|                      :|||.||:...|:...
  Rat  1243 -------MSIFKYYSIQEIR-KLCSSLGSLNTFSGCQHELTVYSMDKRAIGRHVTAMAATGLIYF 1299

  Fly  1597 IINVLIE---WHLLRRLWQRV-ERLLDCTYRRELDK--LGQLKLVNIQS-----IFKSCVDTGEA 1650
            :..:|:|   |:|...:::.| ..:....|:..:.|  .|..:..::|:     :..|.......
  Rat  1300 LFIILLETTSWNLKAFIYRYVLFGIYKIFYKARMSKELSGDSEDEDVQNERETILQHSWHSLNST 1364

  Fly  1651 VRAENLWLAYRR--GHYAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFE-- 1711
            |..:.|...|.:  ...||||::.::|:.|||||||.|||||:|.||:|||:.....|.::.|  
  Rat  1365 VLIKKLIKIYFKIPPTLAVRNISLTIQKEECFGLLGLNGAGKTTTFKILTGEEIATSGDVFIEGY 1429

  Fly  1712 ---------QPGISYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPYKDV 1765
                     :..|.||||.:.|...:|:.|.:..|.|:.||  .::..:::.:|....|:|..:.
  Rat  1430 SITRNILKVRSKIGYCPQFDALLDYMTSREILTMYARVWGIPENNIRSYVNNLLKMLYLKPQAEK 1494

  Fly  1766 QVRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVS 1830
            .:..|||||:|:|:.|:...|.:..|.:|||::.|||:.|.|::..:.:...:.:.:::||||:.
  Rat  1495 FIYTLSGGNKRRLSTAIAIMGNSSVVFLDEPSTGMDPLARRMLWNAVIRTRESGKVIIITSHSME 1559

  Fly  1831 EIEHLCQRVAVLRAGQVIASDSPQRLKSEHGGYYA--VTCFCGPAQQAI--LSRSLNQRLPGARD 1891
            |.|.||.|:|::..|:::...|||.||::.|..|.  :....|.....:  |...:.:..||:..
  Rat  1560 ECEALCTRLAIMVQGKLVCLGSPQHLKNKFGNIYTMNIKFKTGTDDDVVQDLKNYIAEVFPGSDL 1624

  Fly  1892 LQHYAHSLRFLVRVRSPGSLGDAPLLSELFAIL--CDVCVNVARFSLSRCRFETVFERILDSSES 1954
            .|.....|.:.:..:. .|.|      ::|.||  .....|:..:|:|:...|.||  :..::..
  Rat  1625 KQENQGILNYYIPSKD-NSWG------KVFGILEKAKEDYNLEDYSISQITLEQVF--LTFANPD 1680

  Fly  1955 NGSNGVHK 1962
            |..:|..|
  Rat  1681 NTESGYEK 1688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 36/156 (23%)
ABC_subfamily_A 859..1073 CDD:213230 77/227 (34%)
drrA 865..1162 CDD:130256 100/350 (29%)
ABC2_membrane_3 1230..1601 CDD:289468 78/418 (19%)
Mem_trans 1436..>1552 CDD:304621 17/115 (15%)
ABC_subfamily_A 1651..1857 CDD:213230 75/220 (34%)
drrA 1666..1945 CDD:130256 91/297 (31%)
Abca14XP_038957098.1 rim_protein <100..1681 CDD:130324 401/1689 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342261
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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