Protein Alignment ldd and CG11147

DIOPT Version :10

• Sequence 1: NP_001285513.1
• Gene: ldd / 318066
• FlyBaseID: FBgn0083956
• Length: 1998
• Species: Drosophila melanogaster
• Sequence 2: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Alignment Length: 737
• Identity: 166/737 - (22%)
• Similarity: 286/737 - (38%)
• Gaps: 176/737 - (23%)

  Fly   862 NVSKLYGS----KCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGE--- 919
            |..|.|||    |..::.|:::..|..:..|||.:|.||:||:..:.||.|.:.|:|::.|.
  Fly     8 NGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPG 72

  Fly   920 --------HQVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKH 976
                    .:||...|:..|:..:|.:|.:..:.:|      .|..:|...|..:.|:.|    .
  Fly    73 EPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRI------YGLTDERIREKFKLLKEL----L 127

  Fly   977 ESYPSWQL----SGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQ-LIERLRQGR-AV 1035
            :..|:.|:    |||.:|||..|.|.|..|.::|||||..|:|...|:.||. |:|..|..: ||
  Fly   128 QLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAV 192

  Fly  1036 IFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQLL 1100
            |..||:::|||. ::.:.:||||.::|:.:        .:|..|:..       |..|:.|..:|
  Fly   193 IITTHYIEEAKQ-ANCIGLMRNGVLLAEDT--------PTNIMIKFG-------TQSIEDAFLIL 241

  Fly  1101 PQTQVTHSGAADYPHSLTINASYAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEFEQL 1165
            .|.|......|..   :..|.:.|   .|.||...|::.:.       :..:.....:..| |.|
  Fly   242 SQRQGNEDELAQI---MDHNKNQA---LPAAVLPPEVIDTH-------EPNMPEKQPIPFE-EPL 292

  Fly  1166 NRNGEDAGPRRPASDRSGVVAGPAMITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALF 1230
            |.|            |..:..          |...:.:.||.|....|.|....::::||.|.:.
  Fly   293 NEN------------RKKIFF----------TTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQ 335

  Fly  1231 ELCAMWFVSYRLEDDFDTVLPLSRSLYPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNT 1295
            ..|....:.       .|...|...:|....:    .....|.|.|....:   |...|..:||.
  Fly   336 LTCFYLAIG-------KTPTNLEIGVYSGEVE----NYGECFDENLVTVYK---DSDNESCLFNK 386

  Fly  1296 SQQSYDWVLNSWGEYSERRY----------------GGY-----------------GLNGSGATV 1327
            ....|..||..  :.:.|:|                .||                 |::.|...|
  Fly   387 LSCRYIRVLGD--DVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSVMEDGIHSSDGAV 449

  Fly  1328 WYNNKGYH----------SMMAWLNDLNSELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQ 1382
            .:.....|          .|...|.|..|..:|:.:.|...|...::.|.:.......::.|..|
  Fly   450 DHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQ 514

  Fly  1383 AGDGSMVFILLIAFGLVVASGSVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLV--MVLGL 1445
            ......|.:.::.|...:.:.:|: ::||::|...:..|.||||     ..::|.:|:  :::..
  Fly   515 QYCAPGVVMTMVFFLATLMTAAVF-ISERMDGIWDRTLLAGVSA-----TEMLWAHLLTQLIIMA 573

  Fly  1446 IVCLVVILMFGMPVF-----VDRQQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFC-- 1503
            :....||:..|: ||     .|...|:|::.|: ||          ...:|.    ..:|:||
  Fly   574 LQSFEVIMYIGL-VFDTYNNGDTTTLIGLLTLT-AF----------CGMLFG----LFISVFCKS 622

  Fly  1504 ---ANLIVPLVTMGIILILGVV 1522
               ||.:.......:|::.|::
  Fly   623 HTEANFVATGAFYPMIILCGLL 644

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ldd	NP_001285513.1	rim_protein	179..1867	CDD:130324	166/737 (23%)
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	79/262 (30%)
		ABC2_membrane_3	322..702	CDD:463674	67/361 (19%)
		YadH	513..710	CDD:440604	33/154 (21%)