DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and Abca15

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_001099763.2 Gene:Abca15 / 293442 RGDID:1305981 Length:1668 Species:Rattus norvegicus


Alignment Length:1454 Identity:353/1454 - (24%)
Similarity:616/1454 - (42%) Gaps:297/1454 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 DNMQFYTKQFPYPAFLNDVFKRGLYLAQGVQVAYLLGLVVFV--ALSVRERIWMRESRNSMLMRS 666
            :::..:.::|||||:.:|.|    ||.....|...:..:.|:  .:.|...:|.:|:|.......
  Rat   233 NDVSLFIQRFPYPAYYHDHF----YLFANTFVPLTVASIFFLNHLILVWSIVWEKENRLKEYQLM 293

  Fly   667 MGLKAHSELVAWALMSFLELC-----VIFALISGVLY----SGGILGYTNWFFMMFYCLSFGLCL 722
            :||:   ..:.|....|...|     :||..|  ||:    ...|..|.:...:....|.:.:..
  Rat   294 IGLR---NWMFWIAYFFTFFCLYFINIIFMCI--VLFVKIDPAPIFQYNDPILVFILLLFYAISS 353

  Fly   723 ISFCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLSVFESFLVDLSFTTAFAKGWGEL 787
            |.|.:|.:..||..:......:.|||::..|.|.:......:...:..:....|....|.|:..|
  Rat   354 IFFSFMISTLFNRVSFAVSLGSFLFFLTYLPAITMNQSFEHMPPRQKLIWSFDFNVGMAFGFRFL 418

  Fly   788 IRMELQQEGLTVRHLIQVGPARSECAM---ALLMFLLDLLLYAVIG------------------- 830
            :..|.::.|:...::..  |..|:..:   .|.|.|:|..:|.::.                   
  Rat   419 VNAETRKTGMKWNNIFL--PTDSDSLLFTYVLGMLLVDAFIYGLVAWYIEAVFPGEYGVPKPWNF 481

  Fly   831 -------LAYQRYKKTDNYSFVKVSRSQ------LDGKLGASLVNVSKLYG----SKCAVSNLSL 878
                   ....|.:|.:...|.|...|:      .|...|..:.::.|::.    :|.|:::|||
  Rat   482 FLMHSYWFGESRQQKPEITQFCKRVESKYFEVEPTDLTAGIQIKHLHKVFQENNITKVAINDLSL 546

  Fly   879 DFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGE----HQ------VGVCWQDNILIP 933
            :....|::.|||.|||||||.:.:|:|....:||:..:.||    |.      :|:|.|.|:|..
  Rat   547 NVYEGQITVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHGEDISQHMDQIRNFLGLCPQQNLLFD 611

  Fly   934 TLTAREHLQLYAQIKIPPGGSGGVEE--IRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLCVAI 996
            .||..|||..|.::|       ||.:  ...|....|.:.|..:.....|..||||.:|:|.:.|
  Rat   612 HLTVSEHLYFYCRVK-------GVPQNMCLEETNNMLSAFNLTEKRDAFSKSLSGGMKRKLAIII 669

  Fly   997 AFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRII 1061
            |.|....|||||||.:|:|..:|:..|.:::..:|.|.::..||:||||..|.|.:.||..|.:.
  Rat   670 ALIGGSKVVILDEPTSGMDPASRRSTWDVVQTYKQNRTILLTTHYMDEADMLGDRIAIMVQGTLR 734

  Fly  1062 AQHSRDSLQRL--------------CTSNYSIRL---RCADATGVTFVIQKAQQLLPQTQVTHSG 1109
            ...|...|:||              |..:...:|   ....||..|.|..:...:||: :.||..
  Rat   735 CCGSSVFLKRLYGVGSHIVMVKEPVCDVDEISKLIHYYIPTATLKTNVGNELSFILPK-EYTHKF 798

  Fly  1110 AA------DYPHSLTINASYAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEFEQLNRN 1168
            .|      :...:|.| :|:...:|.....||.:.:.:   .|..|:|.|.|.|...:..: ||:
  Rat   799 EALLTALEENQENLGI-SSFGMSITTMEEVFLRVSKME---DSKPDMEATQSPSAGSKGNR-NRD 858

  Fly  1169 GEDAGPRRPASDRSGVVAGPAMITDEP-------PTACKQFRLLMGKRLRHLSRNYRLL---LYV 1223
            .|       :|.|:|.   |....|:.       |...:||..:..|||.:..||:|:|   :..
  Rat   859 VE-------SSMRAGF---PTQSEDQTIVFNTGCPLYLQQFHAMFMKRLMYNWRNWRVLSVQILG 913

  Fly  1224 LLLPALFELCAMWFVSYRLE----DDF-DTVLP--------LSRSLYPQTAQFL---SHERATSF 1272
            |::.....|.:..|...|:.    ||: .|::|        |:.||.......|   :|:.....
  Rat   914 LVISTFLLLKSHEFRHKRIRQMNLDDYGQTIVPFSILGKSNLTTSLLIHLENMLKPGNHQLKEVQ 978

  Fly  1273 SEKL-YPQLRTSCDHLGECRVFNTSQQSYDWVLNSWGEYSERRYGGYGLNGSGATVWYNNKGYHS 1336
            .:.| |.:....|.||  |.|..:.:                    .....:..||.:||:.|||
  Rat   979 GDLLKYLEGNEECIHL--CIVALSIK--------------------VAAGRAKLTVLFNNEAYHS 1021

  Fly  1337 MMAWLNDLNSELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMV-FILLIAFGLVV 1400
            ....|..|:: :|..:::.:.:||...::|     ....||....::..|.:| |.:.:...|:|
  Rat  1022 PSLSLAVLDN-ILFMSLSGANASITVFHKP-----QPRPTSKEWPRSTYGKIVAFKIQLGMALLV 1080

  Fly  1401 ASGSVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQ 1465
            :...:..|.||:...|..|.|.|.|.:.|||.|||:|:::..:.....||:...:.:.::|....
  Rat  1081 SGFCILTVTERITKAKHMQFLSGASVLVYWLSALVFDFIIFFISCCFLLVMFKYYKIDIYVTDYH 1145

  Fly  1466 LVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIF--------CANLIVPLVTMGIILILGVV 1522
            ::..:.:.:.|.::.:|..::...:||.|..|.:.:.        ...||..::..|:..|:.  
  Rat  1146 ILETMLILILFGWSAIPLTYLMSFLFSKSIPAYIQLLVFYYLSGTSGLLIDTIIEAGLSTIIS-- 1208

  Fly  1523 GDGPAWDDWRHALNQAFLIFPIHALGDGFLE---------LC---KNYMVAL----VFRRYDIDS 1571
                  :..:..|..:.|.||.:.||....|         ||   ||.:..|    .:.:.:|.|
  Rat  1209 ------NSTQTFLLSSLLFFPTYNLGKCISEYTVIYQRKILCIQQKNVLKYLNCSKEYTKKNIYS 1267

  Fly  1572 YKHPLASDLLGRHFTALLLVGVAALI-----------INVLIEWHLL------------------ 1607
            .|.|    ::|::..|:.:.|...|:           :.:||..|:.                  
  Rat  1268 LKKP----MIGKYLIAMSIAGFVYLLFIFFWENISWKLRMLIHQHIYFGVCKKYKSDIISNELSG 1328

  Fly  1608 -----------RRLWQRVERLLDC-TYRRELDKLGQLKLVNIQSIFKSCVDTGEAVRAENLWLAY 1660
                       |.:..:.|:.|:| ...::|.|:          .|||.:               
  Rat  1329 TSEDNDVENERREILYQPEKFLNCPVLIKQLTKI----------YFKSPL--------------- 1368

  Fly  1661 RRGHYAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFEQPGIS--------- 1716
               ..||:|::.::|..|||||||.|||||:|.|::|||::.|..|.::.:  |||         
  Rat  1369 ---ILAVKNISLAIQERECFGLLGFNGAGKTTTFQILTGEITPTAGDVFID--GISITKDVLKVR 1428

  Fly  1717 ----YCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPYKDVQVRNLSGGNR 1775
                ||||.:.|...||..|.:..|.|:.||  |.:..:::..|::.||.|:.:..:...|.||:
  Rat  1429 SKIGYCPQFDALLEYLTGWEIMVMYARIWGISERQIRPYVNTYLNSLELEPHANSLISTYSEGNK 1493

  Fly  1776 RKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVSEIEHLCQRVA 1840
            |:|:.|:...|....:.:|||::.|||..|.:::..:.::..:.:|:::||||:.|.|.||.|::
  Rat  1494 RRLSTAIAMMGKPSVIFLDEPSTGMDPRARRLLWDAVIKIRESGKAIIITSHSMEECEALCTRLS 1558

  Fly  1841 VLRAGQVIASDSPQRLKSEHGGYY 1864
            ::..|::....|||.||::.|..|
  Rat  1559 IMVHGKLTCLGSPQYLKNKFGDIY 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 33/149 (22%)
ABC_subfamily_A 859..1073 CDD:213230 79/243 (33%)
drrA 865..1162 CDD:130256 102/335 (30%)
ABC2_membrane_3 1230..1601 CDD:289468 87/423 (21%)
Mem_trans 1436..>1552 CDD:304621 20/123 (16%)
ABC_subfamily_A 1651..1857 CDD:213230 71/220 (32%)
drrA 1666..1945 CDD:130256 75/214 (35%)
Abca15NP_001099763.2 ABC2_membrane_3 <255..464 CDD:289468 42/215 (20%)
CcmA 522..834 CDD:224054 96/320 (30%)
ABC_subfamily_A 522..743 CDD:213230 76/227 (33%)
ABC2_membrane_3 <1007..1195 CDD:289468 44/193 (23%)
ABC_subfamily_A 1354..1575 CDD:213230 76/250 (30%)
drrA 1369..1662 CDD:130256 75/216 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342243
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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