DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and Abca17

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_001026807.1 Gene:Abca17 / 287112 RGDID:1560494 Length:1773 Species:Rattus norvegicus


Alignment Length:1604 Identity:395/1604 - (24%)
Similarity:654/1604 - (40%) Gaps:356/1604 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 NMQFYTKQFPYPAFLNDVFKRGLYLAQGVQVAYLLGLVVFVALSVRERIWM-RESRNSMLMRSMG 668
            |:|...::||..:.:.|.|   |.:.|......|:...:.|.|.:...|.: :|.:....|..||
  Rat   236 NLQVSVQRFPSGSHIQDPF---LVILQNEFPLLLMLSFICVELIITNSILLEKERKQKEYMYLMG 297

  Fly   669 LKAHSELVAWALMSFLELCVIFALISG--VLY---SGGILGYTN----WFFMMFYCLSFGLCLIS 724
            |:.....|||.:..||...|   .:||  ||:   ..|:..:.|    ..|:...|  |.:..|.
  Rat   298 LENWLHWVAWFITFFLSALV---TVSGMTVLFCTKMNGVAVFRNSNPTLIFIFLMC--FAIATIF 357

  Fly   725 FCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLSVFESFLVDLSFTTAFAKGWGELIR 789
            |.:|.:.||..|::|.|...::||.:..|::.:.....:.:..:..|..|....|.|.|...:..
  Rat   358 FAFMMSTFFQRAHVGTVIGGIVFFFTYLPYMYITFSYHQRTYSQKILSCLFSNVAMAMGVRFISL 422

  Fly   790 MELQQEGLTVRHLIQVGPARSECAMALLMFLLDLLLYAV------------IGLAYQRY------ 836
            .|.:..|:..|::..|....| ....|:|.|||..||.:            ||:....|      
  Rat   423 FEAEGTGIQWRNMGSVWGDFS-FTQVLVMLLLDSFLYCLVAFLVESLFPRKIGMPKSWYIFAKCP 486

  Fly   837 -------------------KKTDNYSFVKVSRSQLDGKLGASLVNVSKLY------GSKC-AVSN 875
                               :||....|:   :.:..|.:.|  :.:..||      .||| ||.:
  Rat   487 LWRKKSFPVIPPLLVIGDPEKTSKGDFL---QDEPAGHINA--IEIQHLYKVFYTGRSKCIAVKD 546

  Fly   876 LSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAG----------EHQVGVCWQDNI 930
            ||::..:.|::.|||.|||||:|:..:|||.|..|.|...:.|          ...||.|.|.:|
  Rat   547 LSMNLYKGQITVLLGHNGAGKTTVCSVLTGLIPPSKGHAYIHGCEISKDMVRIRKNVGWCPQHDI 611

  Fly   931 LIPTLTAREHLQLYAQIKIPPGGSGGV--EEIRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLC 993
            |....|..:||..|.|:|       |:  ::...::.:.|.:|......:..|..||||.:|:|.
  Rat   612 LFDNFTVTDHLYFYGQLK-------GLSHQDCHEKIEEMLHTLGLEDKRNSRSKFLSGGMKRKLA 669

  Fly   994 VAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNG 1058
            :.||.||...|:|||||.:|:|:.:|:.||.|:::.:..|.|:..|||||||..|.|.:.|:..|
  Rat   670 IGIALIAGSKVLILDEPTSGMDSSSRRAIWDLLQQQKGDRTVLLTTHFMDEADLLGDRIAILAKG 734

  Fly  1059 RIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQLLPQTQVTHSGAADYPHSLTI---- 1119
                                 .|:|....  :|:.||            .||..|   :||    
  Rat   735 ---------------------ELQCCGTP--SFLKQK------------YGAGYY---MTIIKTP 761

  Fly  1120 ------NASYAEHLTPGAV-----------------------EFLELLQSQVTAG---------- 1145
                  .|....|..|.|:                       .|.:|.|.|...|          
  Rat   762 LCDTEKLAKVIYHHIPNAILESRIGEEMIFTLPKKAMPRFEALFADLEQRQTELGISTFGASVTT 826

  Fly  1146 ---------SISDVELTTSSSLEQEFEQLNRNGEDAGPRRPASDRSGVVAGP--AMITDEP---- 1195
                     .::|......:........|.||      .|...||...:...  ::.:|:|    
  Rat   827 MEEVFIRVCKLADPSTNVLTEKRPSLRHLPRN------HRVPVDRIKCLHSRIFSLSSDQPIRLN 885

  Fly  1196 ---PTACKQFRLLMGKRLRHLSRNYRLLLYV-LLLPALFELCAMWFVSYRLEDDFDTVLPLSRSL 1256
               ...|:||..::.|::....||:.|:|.| :|||.:..:.::.|.:::|....:..|.|:...
  Rat   886 TGFSLLCQQFYAMLLKKVAFSRRNWMLVLSVQILLPLVIIMLSLSFFNFKLRKLDNVPLELTLQT 950

  Fly  1257 YPQT-AQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNTSQQSYDWVLNSWGEYSERRYGG--- 1317
            |.|| ..|...|     :.:|.|||                ..::..:|.:.|:...|..|.   
  Rat   951 YGQTIVPFFIAE-----NSRLDPQL----------------SDNFVKMLVAAGQVPLRIQGSVEN 994

  Fly  1318 ----------------YGLNGSGATV--------WYNNKGYHSMMAWLNDLNSELLRTTMNDSES 1358
                            |.:..|...|        .:||:.|||....|..:::.|.: .::.:.:
  Rat   995 FLLKKAKEAPEDFDKLYVVAASFEDVNDHTTVKALFNNQAYHSPSLALALVDNVLFK-LLSGANA 1058

  Fly  1359 SILTLNEPWKLGFAELSTSSILRQAGDGSMV---FILLIAFGLVVASGSVYLVNERVNGEKLQQR 1420
            ||.|.|.|......||| .:||.|...|..:   |:..|||  :.:|.|:..|.|:....|..|.
  Rat  1059 SITTTNYPQPQTAMELS-ETILYQGPKGHYLVVNFLFGIAF--LSSSFSILTVGEKSIKSKNLQF 1120

  Fly  1421 LCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVGIIGLSLAFSFACVPSVH 1485
            |.|||...:||.||:||.:..::..::.::|...:....|...|.:..::.:.:.:.:|.:|.|:
  Rat  1121 LSGVSMAAFWLSALLWDLISFLVPTLLLVLVFFWYKEEAFAHPQSIPAVVLIMMLYGWAIIPLVY 1185

  Fly  1486 VAEKIFSDSSIAIVSIFCANLIVPLVTMGI--ILILGVVGD-GPAWDDWRHALNQAFLIFPIHAL 1547
            .....|......     |..|:..|..:.|  ::::.|..: ...:.:....|:..|||||.|.|
  Rat  1186 TVSFSFKTPGSG-----CVKLVAMLTFLSISPVVLVTVTSEIDLGYTELSDTLDHIFLIFPGHCL 1245

  Fly  1548 GDGFLELCKNYMVAL--------------VFRRYDIDSYKHPLASDLLGRHFTALLLVGVAALII 1598
            |..|..|..|:.:..              |...|.:....:...|..:|::.|||.::|...:.:
  Rat  1246 GMAFSNLYYNFEIKKFCNAKNLSDIDCNDVLEGYVVQKNIYAWESLGIGKYLTALAILGPVYITL 1310

  Fly  1599 NVLIEWH----LLRRL-----WQRVERLLDCTYRRELDKLGQLKLVNIQSIFKSCVDTGEAVRAE 1654
            ..|.|.:    |..||     .|::..||:.|...:.|.|.:.:  ||:....:.:.....| .:
  Rat  1311 LFLTEANAFCALKARLSGFFCKQKLRMLLNVTGAEDEDVLEEAE--NIKYHLDTLIKKSPLV-VK 1372

  Fly  1655 NLWLAYRR--GHYAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQ--------------LQP 1703
            .|...|:.  ...||..|:|.|:..|||||||.|||||::||.:||.:              ::.
  Rat  1373 ELSKVYKEKVPLLAVNKVSFVVKEKECFGLLGLNGAGKTSIFNMLTREQPITSGDAFVKGFNIRT 1437

  Fly  1704 DVGQIYFEQPGISYCPQSNPLDPLLTTTECIRFYGRLRGIRD--LDQFLDRVLDTYELRPYKDVQ 1766
            |:.::   |..|.|||:.:.|...:|..|.:..:.|:|||.:  :...:|.:|:...:..|.|..
  Rat  1438 DMAKV---QQWIGYCPEFDALLNFMTGREMLVMHARIRGIPECHIKTCVDMILENLLMCVYADKL 1499

  Fly  1767 VRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVSE 1831
            |:..|.||:|.|:.|:...|....:|:|||::.||||.|.:|:..:.::..:.:.:|:||||:.|
  Rat  1500 VKTYSDGNKRVLSTAIALLGEPTVILLDEPSTGMDPVARRLVWDAVGRVRESGKTIVITSHSMEE 1564

  Fly  1832 IEHLCQRVAVLRAGQVIASDSPQRLKSEHGGYYAVTCFCGPAQQAILSRSLNQRLPGARDLQHYA 1896
            .|.||.|:|::..||.....|||.|||..|..|::        ||.:.|...|::     |:.: 
  Rat  1565 CEALCTRLAIMVQGQFKCLGSPQHLKSRFGSGYSL--------QAKVRRKWQQQM-----LEEF- 1615

  Fly  1897 HSLRFLVRVRSPGSL--------------GDAPLLSELFAILCDVCVN--VARFSLSRCRFETVF 1945
               :..|.:..|||.              |.....:::|.|:.....:  :..:|:|:...|.:|
  Rat  1616 ---KAFVDLTFPGSSLEDEHQSMVQYYLPGQNLSWAKVFGIMEQAKKDYVLEDYSISQLSLEDIF 1677

  Fly  1946 ----ERILDSSESNGSNGVHKDQQQQVA-------KNDLPSKSP 1978
                ..:.|:.|:        .||.|.|       .|..|..||
  Rat  1678 LSFTRPVPDTKEN--------IQQGQAALDSSLSPSNSRPISSP 1713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 39/148 (26%)
ABC_subfamily_A 859..1073 CDD:213230 77/232 (33%)
drrA 865..1162 CDD:130256 97/367 (26%)
ABC2_membrane_3 1230..1601 CDD:289468 91/418 (22%)
Mem_trans 1436..>1552 CDD:304621 23/118 (19%)
ABC_subfamily_A 1651..1857 CDD:213230 75/223 (34%)
drrA 1666..1945 CDD:130256 92/310 (30%)
Abca17NP_001026807.1 ABC2_membrane_3 <262..464 CDD:289468 52/207 (25%)
ABC_subfamily_A 525..746 CDD:213230 80/250 (32%)
drrA 543..834 CDD:130256 91/335 (27%)
ABC2_membrane_3 913..1255 CDD:289468 87/371 (23%)
CcmA 1369..1682 CDD:224054 96/333 (29%)
ABC_subfamily_A 1369..1590 CDD:213230 75/224 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1690..1773 8/32 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342198
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.750

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