DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34120 and Abca5

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:NP_775429.1 Gene:Abca5 / 286970 RGDID:628661 Length:1642 Species:Rattus norvegicus


Alignment Length:1876 Identity:403/1876 - (21%)
Similarity:692/1876 - (36%) Gaps:522/1876 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 ILTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVADLMD 371
            :::.:|.|..::|..|    :..||:.||::.:        .:..|.       .:..|.:.:|.
  Rat    48 LISMMHPNKKYEEVSD----IELSPMDKSILSN--------LILGYT-------PVTNTTSSVMQ 93

  Fly   372 CVSADRFEAVESVEELHKRAYELNQNKLFLAAL----NLEDVGLKQA-SYRLHMDTDNTQPTFEN 431
            .||.|....|...||.      .::.:|..::|    |...|..|.. ||.|             
  Rat    94 RVSTDHLPDVLVTEEY------ASEKELLASSLSKPSNFVGVVFKDVMSYEL------------- 139

  Fly   432 RNRFWFPG--PADSMVIDLK------------YHRGFVQLKQMVDLGIIKSKREEAGFAPEEDGP 482
              || ||.  |..|:.:|.:            :..||..|:..:|..||:.|             
  Rat   140 --RF-FPDMVPVSSVYMDSRAGCSKSCDAAQYWSSGFTALQASIDAAIIQLK------------- 188

  Fly   483 ESGRSLSGLFSIKQVENDTPDEDDDDFDLSLEESGDEKAAPKVSASASDHEATTISPSSLDGVTT 547
                                                                |.:|       ..
  Rat   189 ----------------------------------------------------TNVS-------LW 194

  Fly   548 EEVRVTTEQTVVSGDPDLLLLKNEDVLKRSKRQGLFDLLGGFGGSGDANKKNKFEVDNMQFYTKQ 612
            .|:..|  :.|:.|:..::.:                                            
  Rat   195 RELEST--KAVIMGEAAVVEI-------------------------------------------- 213

  Fly   613 FPYPAFLNDVFKRGLYLAQGVQVAYLLGLVV-------FVALSVRERIWMRESRNSMLMRSMGLK 670
                    |.|.||:         .|:.||:       |:|:.:   :..:|.|....::.|||.
  Rat   214 --------DTFPRGV---------ILIYLVIAFSPFGYFLAIHI---VAEKEKRLKEFLKIMGLH 258

  Fly   671 AHSELVAWALMSFLELCVIFALISGVLYSGGIL---GYTNWFFMMFYCLSFGLCLISFCYMCTNF 732
            ..:..::|.|: :..|..:.:|:..|:.:...|   ..:...|::|:.  :||..:.|..|.|..
  Rat   259 DTAFWLSWVLL-YTSLIFLMSLLMAVIATASSLFPQSSSIVIFLLFFL--YGLSSVFFALMLTPL 320

  Fly   733 F-NSANIGAVASALLFFISLCPFIIVLMFDAKLSVF-ESFLVDLSF------TTAFAKGWGELIR 789
            | .|.::|.|.    ||::     :|..|...|.|. |||...|.:      ..||..|..:::.
  Rat   321 FKKSKHVGVVE----FFVT-----VVFGFVGLLIVLVESFPRSLVWLFSPLCQCAFLIGIAQVMH 376

  Fly   790 MELQQEGLTVRHLIQVGPARSECAMALLMFLLDLLLYAVIGLAYQRY------------------ 836
            :|...||.....|.: ||  ....:.|.|..||.:.||::.:...:.                  
  Rat   377 LEDFNEGALFSSLTE-GP--YPLIITLTMLALDSVFYALLAVYLDQVIPGEFGLRRSSLYFLKPS 438

  Fly   837 ---KKTDNY---------------SFVKVSRSQLDGKLGASLVNVSKLYGSKC----AVSNLSLD 879
               |...||               ..|:...|:..||....:..:.|.|..|.    |:.|||.|
  Rat   439 YWSKNKRNYKELSEGNINGNISLNEIVEPVSSEFIGKEAIRISGIQKAYRKKNETVEALRNLSFD 503

  Fly   880 FARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGEH------------QVGVCWQDNILI 932
            ....|::.|||.:|.|||||:.:|.|....|.|...:.|..            .:|:|.|.::..
  Rat   504 IYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDMNF 568

  Fly   933 PTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLCVAIA 997
            ..||..|:|.:.|.:|..|..:     |..||.:.|..|:....:...:.:||||.:|:|.:.||
  Rat   569 DVLTVEENLSILASVKGIPANN-----IIQEVQKVLLDLDMQAIKDNQAKKLSGGQKRKLSLGIA 628

  Fly   998 FIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRIIA 1062
            .:.:|.:::||||..|:|..:|..:|.|::..:..|..:|:|||||||..|:|...::..|.:..
  Rat   629 VLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKC 693

  Fly  1063 QHSRDSLQRLCTSNYSIRLR--------CADATGVTFVIQ--KAQQLLPQT--QVTHS------- 1108
            ..|...|:    |.:.|..|        ||..:..:.|.|  .|..||.|.  |:.:|       
  Rat   694 VGSSIFLK----SKWGIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMD 754

  Fly  1109 ------GAADYPHSLTINASYAEHLTPGAVEFLEL-LQSQVTAGSISDVELTTSSSLEQEFEQLN 1166
                  .|.|...:|.: .||...:|.....||:| :::::..   :|..:.|....|:|.:..:
  Rat   755 KFSGLFSALDIHSNLGV-ISYGVSMTTLEDVFLKLEVEAEIDQ---ADYSVFTQQPREEETDSKS 815

  Fly  1167 RNGEDAGPRRPASDRSGVVAGPAMITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFE 1231
            .:..:......:..::.:|:..::...:..|..| |..|..||.....|:..|||.:.....:| 
  Rat   816 FDEMEQSLLILSETKASLVSTMSLWKQQVSTIAK-FHFLSLKRESKSVRSVLLLLLIFFAVQIF- 878

  Fly  1232 LCAMWFVSYRLEDDFDTVLPLSRSLYPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNTS 1296
               |:.|.:..:   :.|:|:  .|.|........::...:...|..|..|..| :.:...|.|.
  Rat   879 ---MFLVHHSFK---NAVVPI--KLVPDLYFLKPGDKPHKYKTSLLLQNSTDSD-INDLIDFFTQ 934

  Fly  1297 QQSYDWVLNSWGEY--------------SERRYGGYGLNGSGATVWYNNKGYHSMMAWLNDL-NS 1346
            |.....:.|. .:|              ||:.|        ..|..:|:...:|:...:|.: |.
  Rat   935 QNIIVAMFND-SDYVSAAPHSAALNVVQSEKDY--------VFTAVFNSTMVYSLPVMMNIISNY 990

  Fly  1347 ELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVASGSVYLVNER 1411
            .|....:.|:       .:.|...|.:..|..:.:..     ::......|::|.:...|...|.
  Rat   991 YLYHLNVTDT-------IQIWSTPFIQEITDIVFKVE-----LYFQAALLGIIVTAMPPYFAMEN 1043

  Fly  1412 VNGEKL----QQRLCGVSAVTYWLVALVWD------------------------YLVMVLGLIVC 1448
            ....|:    |.:|.|:....||:...|.|                        |.|..|.::.|
  Rat  1044 AENHKIKAYTQLKLSGLLPSAYWIGQAVVDIPLFFVVLTLMLGSLFAFHHGLYFYPVKFLAVVFC 1108

  Fly  1449 LV-----VILMFGMPVFVDRQQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSI------- 1501
            |:     |||...:..|..::    |:.....:||           |:|.:::|.|::       
  Rat  1109 LIAYVPSVILFTYIASFTFKK----ILNTKEFWSF-----------IYSVTALACVAVTEITFFL 1158

  Fly  1502 -----------FCANL-IVPLVTMGIILILGVVGDGP----AWDDWRHALNQAFLIFPIHALGDG 1550
                       ||..: |.||:...|..|.|...:.|    |::.|...|  ..:|.|       
  Rat  1159 GYGVTAVFHYTFCIAIPIYPLLGCLISFIKGSWKNIPKTENAYNPWDRLL--VAVIMP------- 1214

  Fly  1551 FLELCKNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAALIINVLIEWHLLRRLWQRV- 1614
            :|: |..::..|  :.|:   .||.      ||.                :.:..|.|.|.|:. 
  Rat  1215 YLQ-CVLWIFLL--QHYE---KKHG------GRS----------------IRKDPLFRALSQKAK 1251

  Fly  1615 -ERLLDCTYRRELD---KLGQLKLVNIQSIFKSCVDTGEAVRAENLWLAY----------RRGHY 1665
             ::..:.....:.|   |..:||:..:...  .|.:...|:...||...|          :....
  Rat  1252 HKKFPEPPINEDEDEDVKAERLKVKELMGC--QCCEEKPAIMVYNLHKEYDDKKDFLHSRKTTKV 1314

  Fly  1666 AVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFEQPG------------ISYC 1718
            |.:.|:|.|::||..||||.||||||||..:|.|.::|..|:|:....|            :.||
  Rat  1315 ATKYVSFCVKKGEILGLLGPNGAGKSTIINILVGDVEPTSGKIFLGDYGSHSNEDDESTKCMGYC 1379

  Fly  1719 PQSNPLDPLLTTTECIRFYGRLRGIR--DLDQFLDRVLDTYELRPYKDVQVRNLSGGNRRKLTVA 1781
            ||:|||.|.:|..|....||.::|:.  |:.:.:.|:....:|:.:....|:.|..|.:|||..|
  Rat  1380 PQTNPLWPDITLQEHFEIYGAVKGMSSGDMKEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFA 1444

  Fly  1782 VTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLL-ARRAVVLTSHSVSEIEHLCQRVAVLRAG 1845
            ::..|.....|:|||::.|||..:..::..|..... .:||.:||:|.:.|.|.:|.|||::.:|
  Rat  1445 LSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSG 1509

  Fly  1846 QVIASDSPQRLKSEHG-GYY---AVTCFCGPAQQAILSRSLNQRLPGARDLQHYAHSLRFLVRVR 1906
            |:....:.|.|||:.| ||:   .:..:....:...|.|.:....|.|...:.::..|.:.:...
  Rat  1510 QLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSSILAYKIPKE 1574

  Fly  1907 SPGSLGDAPLLSELFAILCDV--CVNVARFSLSRCRFETVF-ERILDSSESNGSNG 1959
                  |...||:.||.|.:.  ...:..:|.|:...|.|| |...:..|.:.|.|
  Rat  1575 ------DVQSLSQSFAKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEEDNSCG 1624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 34/149 (23%)
ABC_subfamily_A 859..1073 CDD:213230 70/229 (31%)
drrA 865..1162 CDD:130256 95/338 (28%)
ABC2_membrane_3 1230..1601 CDD:289468 79/441 (18%)
Mem_trans 1436..>1552 CDD:304621 31/167 (19%)
ABC_subfamily_A 1651..1857 CDD:213230 73/230 (32%)
drrA 1666..1945 CDD:130256 90/299 (30%)
Abca5NP_775429.1 ABC2_membrane_3 <214..416 CDD:289468 56/228 (25%)
CcmA 476..788 CDD:224054 91/321 (28%)
ABC_subfamily_A 478..701 CDD:213230 69/227 (30%)
ABC2_membrane_3 <957..1224 CDD:289468 57/311 (18%)
CcmA 1288..1615 CDD:224054 97/332 (29%)
ABC_subfamily_A 1290..1521 CDD:213230 73/230 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.650

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