Sequence 1: | NP_001285513.1 | Gene: | CG34120 / 318066 | FlyBaseID: | FBgn0083956 | Length: | 1998 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006533124.3 | Gene: | Abca8a / 217258 | MGIID: | 2386846 | Length: | 1653 | Species: | Mus musculus |
Alignment Length: | 1544 | Identity: | 351/1544 - (22%) |
---|---|---|---|
Similarity: | 600/1544 - (38%) | Gaps: | 370/1544 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 641 LVVFVALSV-RERIWMRESRNSMLMRSMGLKAHSELVAWALMSFLELCV-------IFALISGVL 697
Fly 698 YSGGILGYTNWFFMMFYCLSFGLCLISFCYMCTNFFNSANIGAVASALL---FFISLCPFIIV-- 757
Fly 758 ---LMFDA---KLSVFESFLVDLSFTTAFAKGWGELIRMELQQEGLTVRHLIQVGPA--RSECAM 814
Fly 815 ALLMFLLDLLLYAVIGLAYQR-------------------------------------YKKTDNY 842
Fly 843 SFVKVSRSQLDGKLGASLVNVSKLYGSKC----AVSNLSLDFARNQVSCLLGRNGAGKSTLIKLL 903
Fly 904 TGQIRQSSGKVLLAGEHQ---------------VGVCWQDNILIPTLTAREHLQLYAQIKIPPGG 953
Fly 954 SGGVE--EIRSEVAQTLQSLNFGKHESYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDA 1016
Fly 1017 KARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRL 1081
Fly 1082 RCADATGVTFVIQKAQQLLPQTQVTHSGAADYPHSLTIN--------------------ASYAEH 1126
Fly 1127 LTPGAVEFLELL------QSQVTAGSISDVELTTSSSLEQ--EFEQLNR--NGEDAGPRRPASDR 1181
Fly 1182 SGVVAGPAMITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAMWFVSYRLEDDF 1246
Fly 1247 DTVLPLSRSLY----------PQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNTSQQSYD 1301
Fly 1302 WVLNSWGEYSERRYGGYGLNGSGATVWY-NNKGYHSMMAWLNDLNSELLRTTMNDSESSILTLNE 1365
Fly 1366 PWKLGFAELSTS-SILRQAGDG------SMVFILLIAFGLVVASGSVYLVNERVNGEKLQQRLCG 1423
Fly 1424 VSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVGIIGLSLAFSFACVPSVHVAE 1488
Fly 1489 KIFSDSSIAIVSIFCANLIVPLVTMGIILILGVVGDGPAWDDWRHALNQAFLIFPIHALGDGFLE 1553
Fly 1554 LCKNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAALIINVLIEWHLLRRLWQRV---- 1614
Fly 1615 ER-------------------LLDCTYRRELDKLGQLKLVNIQSIFKSCVDT------------- 1647
Fly 1648 GEAVRAENLWLA----------------------YR----------RGHYAVRNVNFSVQRGECF 1680
Fly 1681 GLLGKNGAGKSTIFKLLTGQLQPDVGQIYF------EQPG-ISYCPQSNPLDPLLTTTECIRFYG 1738
Fly 1739 RLRGIR--DLDQFLDRVLDTYELRPYKDVQVRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMD 1801
Fly 1802 PVTRDMVYATIEQLLL-ARRAVVLTSHSVSEIEHLCQRVAVLRAGQVIASDSPQRLKSEHGGYYA 1865
Fly 1866 VTC-FCGPAQQAILSRSLNQRLPGARDLQHYAHSLRFLVRVRSPGSLGDAPLLSELFAILCDV-- 1927
Fly 1928 CVNVARFSLSRCRFETVFERILDSSESNGSNGVHKDQQQQVAKNDLPSK 1976 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34120 | NP_001285513.1 | ABC2_membrane_3 | <621..760 | CDD:289468 | 32/134 (24%) |
ABC_subfamily_A | 859..1073 | CDD:213230 | 76/234 (32%) | ||
drrA | 865..1162 | CDD:130256 | 92/345 (27%) | ||
ABC2_membrane_3 | 1230..1601 | CDD:289468 | 63/388 (16%) | ||
Mem_trans | 1436..>1552 | CDD:304621 | 17/115 (15%) | ||
ABC_subfamily_A | 1651..1857 | CDD:213230 | 76/247 (31%) | ||
drrA | 1666..1945 | CDD:130256 | 94/291 (32%) | ||
Abca8a | XP_006533124.3 | rim_protein | <258..1630 | CDD:130324 | 347/1521 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838392 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |