DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34120 and ABCA13

DIOPT Version :9

Sequence 1:NP_001285513.1 Gene:CG34120 / 318066 FlyBaseID:FBgn0083956 Length:1998 Species:Drosophila melanogaster
Sequence 2:XP_011513432.1 Gene:ABCA13 / 154664 HGNCID:14638 Length:5059 Species:Homo sapiens


Alignment Length:2111 Identity:547/2111 - (25%)
Similarity:893/2111 - (42%) Gaps:482/2111 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LHSVIDVVNAFVTDERLHKA--VVELAEKANFVSAITTLITSDRFDIIRSNISEIISLVPEIERR 164
            |:|::|:|::.  ...|.||  |.|...:......||.|:.:..|..:..|:....|...     
Human  3183 LNSLLDIVSSL--SALLAKAQHVFEYLPEFLHTFKITALLETLDFQQVSQNVQARSSAFG----- 3240

  Fly   165 MNYSFDIKHLFSNRETFVKLGVLLCGHPFPNTDTIPLVNEILESEDFSQANDAEIDAMPTRRRRR 229
             ::.|.:|.:..::.:|     |...:.|.|   :|.|.|:||.:                 :.:
Human  3241 -SFQFVMKMVCKDQASF-----LSDSNMFIN---LPRVKELLEDD-----------------KEK 3279

  Fly   230 YEDLPTDWRPTKYCKRLYRDVTSTNQGKLTWNTIKPIIQGRILYTPANAMTESVVKFSNASFEEL 294
            : ::|.|  .|.:|.:||:::.....|.|.|..:|||:.|:|||||.......|::.:|.:|..:
Human  3280 F-NIPED--STPFCLKLYQEILQLPNGALVWTFLKPILHGKILYTPNTPEINKVIQKANYTFYIV 3341

  Fly   295 DRLKQLSRAAATILTKLHTNATFQ-----EAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIR 354
            |:||.||.      |.|..::.||     :.|:.|.:..::..|::.|.:...| :::::.|.::
Human  3342 DKLKTLSE------TLLEMSSLFQRSGSGQMFNQLQEALRNKFVRNFVENQLHI-DVDKLTEKLQ 3399

  Fly   355 TNQLIYDIL-------------TTVADLMDCVSADRFEAVESVEELHKRAYELNQNKLFLAAL-- 404
            |...:.|.:             :.:.:|..||:.:||:|::||:.|..:|:||.|...|||::  
Human  3400 TYGGLLDEMFNHAGAGRFRFLGSILVNLSSCVALNRFQALQSVDILETKAHELLQQNSFLASIIF 3464

  Fly   405 --NLEDVGLKQASYRL--HMD-TDNTQPTFENR-----NRFWFPGPADSMVIDLKYHRGFVQLKQ 459
              :|.|...:..|.:|  |:. |..|...:..|     |..|...|.:......||:..|..|:.
Human  3465 SNSLFDKNFRSESVKLPPHVSYTIRTNVLYSVRTDVVKNPSWKFHPQNLPADGFKYNYVFAPLQD 3529

  Fly   460 MVDLGIIKSKREEAGFAPEEDGPESGRSLSGLFSIKQVENDTPDEDDDDFDLSLEESGDEKAAPK 524
            |::..||                                              |.::|.|...|.
Human  3530 MIERAII----------------------------------------------LVQTGQEALEPA 3548

  Fly   525 VSASASDHEATTISPSSLDGVTTEEVRVTTEQTVVSGDPDLLLLKNEDVLKRSKRQGLFDLLGGF 589
            ....|:                                                           
Human  3549 AQTQAA----------------------------------------------------------- 3554

  Fly   590 GGSGDANKKNKFEVDNMQFYTKQFPYPAFLNDVFKR--GLYLAQGVQVAYLLGLVVFVALSVRER 652
                                    |||...:|:|..  |.:.    .:..:|..:|.||..||:.
Human  3555 ------------------------PYPCHTSDLFLNNVGFFF----PLIMMLTWMVSVASMVRKL 3591

  Fly   653 IWMRESRNSMLMRSMGLKAHSELVAWALMSFLELCVIFALISGVLYSGGILGYTNWFFMMFYCLS 717
            ::.:|.:....||.||:......:||.|.:...|.:..|.::.||.:.||..::|.|.:..:.|.
Human  3592 VYEQEIQIEEYMRMMGVHPVIHFLAWFLENMAVLTISSATLAIVLKTSGIFAHSNTFIVFLFLLD 3656

  Fly   718 FGLCLISFCYMCTNFFNSANIGAVASALLFFISLCPFIIVLMFDAKLS-VFESFLVDLSFTTAFA 781
            ||:.::...|:.:.||:.||..|:.::|::.||..|:|::|:...:|| |.::||..|| ||||.
Human  3657 FGMSVVMLSYLLSAFFSQANTAALCTSLVYMISFLPYIVLLVLHNQLSFVNQTFLCLLS-TTAFG 3720

  Fly   782 KGWGELIRMELQQEGLTVRHLIQVGPARSECAMAL----LMFLLDLLLYAVIG------------ 830
            :|...:..:|.|:.|:...::.|   |..:..|..    .|.|.|..||.:.|            
Human  3721 QGVFFITFLEGQETGIQWNNMYQ---ALEQGGMTFGWVCWMILFDSSLYFLCGWYLSNLIPGTFG 3782

  Fly   831 ---------------------------LAYQRYKKTDNYSFVKVSRSQLDGKL-----GASLVNV 863
                                       |:...:...:|:.....|....:|:|     |.:||:|
Human  3783 LRKPWYFPFTASYWKSVGFLVEKRQYFLSSSLFFFNENFDNKGSSLQNREGELEGSAPGVTLVSV 3847

  Fly   864 SKLY-GSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGEH------- 920
            :|.| |.|..|.:|||.|.|:|::.|||.|||||:|:|.:|||....:||.:::.|::       
Human  3848 TKEYEGHKAVVQDLSLTFYRDQITALLGTNGAGKTTIISMLTGLHPPTSGTIIINGKNLQTDLSR 3912

  Fly   921 ---QVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKHESYPSW 982
               ::|||.|.:||:..||.||||.|:|.||.|....   :|:..:|.||||.::..:|:...:.
Human  3913 VRMELGVCPQQDILLDNLTVREHLLLFASIKAPQWTK---KELHQQVNQTLQDVDLTQHQHKQTR 3974

  Fly   983 QLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKY 1047
            .||||.:|:|.:.|||:.....|:||||.:|||..:|..:|.::.:.|:||.:||.||.:|||:.
Human  3975 ALSGGLKRKLSLGIAFMGMSRTVVLDEPTSGVDPCSRHSLWDILLKYREGRTIIFTTHHLDEAEA 4039

  Fly  1048 LSDSLVIMRNGRI--------IAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQLLPQTQ 1104
            |||.:.::::||:        :.:.....|:...|...|: |...|...:..|....:..:||..
Human  4040 LSDRVAVLQHGRLRCCGPPFCLKEAYGQGLRLTLTRQPSV-LEAHDLKDMACVTSLIKIYIPQAF 4103

  Fly  1105 VTHSGAADYPHSLTINASYA---------------EHLTPGAVE-------FLELLQSQVTAGSI 1147
            :..|..::..:::..:...|               .|||...:.       ||.|||.   :...
Human  4104 LKDSSGSELTYTIPKDTDKACLKGLFQALDENLHQLHLTGYGISDTTLEEVFLMLLQD---SNKK 4165

  Fly  1148 SDVELTTSSSLEQEFEQLNRNGEDAGPRRPASDRSGVVAGPAMITDEPPTACKQFRLLMGKRLRH 1212
            |.:.|.|.|.|:......:.:|......|||:     |.|..::.       .|...::.:|||.
Human  4166 SHIALGTESELQNHRPTGHLSGYCGSLARPAT-----VQGVQLLR-------AQVAAILARRLRR 4218

  Fly  1213 LSRNYRLLLYVLLLPALFELCAM---------------------------WFVSYRLEDDFDTVL 1250
            ..|..:..|..||||.||...||                           :|.|....|:.|...
Human  4219 TLRAGKSTLADLLLPVLFVALAMGLFMVRPLATEYPPLRLTPGHYQRAETYFFSSSGGDNLDLTR 4283

  Fly  1251 PLSRSLYPQ---TAQFLSHERATS------FSEKLYPQLRTSC----------------DHLGEC 1290
            .|.|....|   .|.....::.:|      ||   :|:.:.||                :|||..
Human  4284 VLLRKFRDQDLPCADLNPRQKNSSCWRTDPFS---HPEFQDSCGCLKCPNRSASAPYLTNHLGHT 4345

  Fly  1291 RVFNTSQQSYDWVLNSWG----EY----SER-RYGGY-----------GLNG------SGATVWY 1329
                        :||..|    ||    ||: |.||:           |.||      :.|.|||
Human  4346 ------------LLNLSGFNMEEYLLAPSEKPRLGGWSFGLKIPSEAGGANGNISKPPTLAKVWY 4398

  Fly  1330 NNKGYHSMMAWLNDLNS----ELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVF 1390
            |.||:||:.::||.||:    :.|..|::..:..|...:.|:  |.|.|:...||.......:..
Human  4399 NQKGFHSLPSYLNHLNNLILWQHLPPTVDWRQYGITLYSHPY--GGALLNEDKILESIRQCGVAL 4461

  Fly  1391 ILLIAFGLVVASGSVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMF 1455
            .:::.|.::.||....:|.:||.|.|..|.:.|:....||....::|.|..::.:.:|:.||:.|
Human  4462 CIVLGFSILSASIGSSVVRDRVIGAKRLQHISGLGYRMYWFTNFLYDMLFYLVSVCLCVAVIVAF 4526

  Fly  1456 GMPVFVDRQQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPLVTMGIIL--- 1517
            .:..|..|:.|.....|...|.:|.:|.:::..:|||.|.:|.:|....|.|..|.||.|.:   
Human  4527 QLTAFTFRKNLAATALLLSLFGYATLPWMYLMSRIFSSSDVAFISYVSLNFIFGLCTMLITIMPR 4591

  Fly  1518 ILGVVGDGPAWDDWRHALNQAFLIFPIHALGDGFLELCKNYMVALVFRRYDIDSYKHPLASDLLG 1582
            :|.::.......:....|...|.|||...||.|.:|||.|.:...:...:.||||..|...:.||
Human  4592 LLAIISKAKNLQNIYDVLKWVFTIFPQFCLGQGLVELCYNQIKYDLTHNFGIDSYVSPFEMNFLG 4656

  Fly  1583 RHFTALLLVGVAALIINVLIEWHLLRRLWQRVERLLDCTYRRELDKLGQLKLVNIQSIFKSCVD- 1646
            ..|..|...|...|::.||:.|.|||  |.|....|..|.:...|       .:::...|...: 
Human  4657 WIFVQLASQGTVLLLLRVLLHWDLLR--WPRGHSTLQGTVKSSKD-------TDVEKEEKRVFEG 4712

  Fly  1647 --TGEAVRAENLWLAYRR---GHYAVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVG 1706
              .|:.:...||...|||   ...||::::..:.:||||||||.|||||||.||:|.|::....|
Human  4713 RTNGDILVLYNLSKHYRRFFQNIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSG 4777

  Fly  1707 QIYFEQPG---------------ISYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVL 1754
            ......|.               |.||||.:.||.|||..|.:.:|..||||  :.:.:....::
Human  4778 HAIIRTPMGDAVDLSSAGTAGVLIGYCPQQDALDELLTGWEHLYYYCSLRGIPRQCIPEVAGDLI 4842

  Fly  1755 DTYELRPYKDVQVRNLSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLAR 1819
            ....|..:.|..|...|||.:|||:.|:...|....:|:|||:|.|||.::..::.||.:.:...
Human  4843 RRLHLEAHADKPVATYSGGTKRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTIMKEVREG 4907

  Fly  1820 RAVVLTSHSVSEIEHLCQRVAVLRAGQVIASDSPQRLKSEHG-GYYAVTCFCGPA-QQAILSRSL 1882
            .|.||||||:.|.|.||.|:|::..|......|||.:|:..| ||......|..| |...:|..|
Human  4908 CAAVLTSHSMEECEALCTRLAIMVNGSFKCLGSPQHIKNRFGDGYTVKVWLCKEANQHCTVSDHL 4972

  Fly  1883 NQRLPGARDLQHYAHSLRFLVRVRSPGSLGDAPLLSELFAILCD--VCVNVARFSLSRCRFETVF 1945
            ....||.:....:.:.|.:.|    |...|   .|::||.::.:  ..:|:..:|:::...|.||
Human  4973 KLYFPGIQFKGQHLNLLEYHV----PKRWG---CLADLFKVIENNKTFLNIKHYSINQTTLEQVF 5030

  Fly  1946 ERILDSSESNGSNGVHKDQQQQVAKNDL-PS 1975
              |..:||           |||..::.| ||
Human  5031 --INFASE-----------QQQTLQSTLDPS 5048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34120NP_001285513.1 ABC2_membrane_3 <621..760 CDD:289468 40/140 (29%)
ABC_subfamily_A 859..1073 CDD:213230 89/232 (38%)
drrA 865..1162 CDD:130256 108/337 (32%)
ABC2_membrane_3 1230..1601 CDD:289468 116/455 (25%)
Mem_trans 1436..>1552 CDD:304621 34/118 (29%)
ABC_subfamily_A 1651..1857 CDD:213230 82/225 (36%)
drrA 1666..1945 CDD:130256 98/299 (33%)
ABCA13XP_011513432.1 rim_protein 3068..5049 CDD:130324 547/2111 (26%)
ABC_subfamily_A 3842..4062 CDD:213230 88/222 (40%)
ABC_subfamily_A 4719..4945 CDD:213230 82/225 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148363
Domainoid 1 1.000 134 1.000 Domainoid score I5010
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.710

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