Sequence 1: | NP_001285513.1 | Gene: | CG34120 / 318066 | FlyBaseID: | FBgn0083956 | Length: | 1998 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006537617.1 | Gene: | Abca1 / 11303 | MGIID: | 99607 | Length: | 2263 | Species: | Mus musculus |
Alignment Length: | 2482 | Identity: | 567/2482 - (22%) |
---|---|---|---|
Similarity: | 927/2482 - (37%) | Gaps: | 772/2482 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 EVRELLRKDLLVRWRQKGLSLILLAWPVMVFMLLYLIRLKYGSEELEACQYPTRLLPTKNQVVPA 73
Fly 74 AFSYICSIENRCQPAHPYEEYSHWKEAP---------------------------------LHSV 105
Fly 106 IDVVNA------------FVTDER-----------LHKAVVELAEKAN------FVSA----ITT 137
Fly 138 LITSDRF-DIIRSNISEIISL-------VPEIERRMNYSFDI----------------------- 171
Fly 172 -----------KHLFSNR----------------------ETFVKLGVLLCGHPFPNTDTIPLVN 203
Fly 204 EILESEDFSQ---ANDAEIDAMPTRRRRRYEDLPT--DWRPTKYCKRLYRDVTSTNQGKLTWNTI 263
Fly 264 KPIIQGRILYTPANAMTESVVKFSNASFEELDRLKQL-----------------SRAAATILTKL 311
Fly 312 HT--NATFQE---------AFDNLLKLAKSPL-VKSLVGDDFDIGEIERVFEYIRTNQLIYDILT 364
Fly 365 TVADLMDCVSADRFEAVESVEELHKRAYELNQNKLFLA-----ALNLEDVGL-KQASYRLHMDTD 423
Fly 424 NTQPTFENRNRFWFPGPADSMVIDLKY-HRGFVQLKQMVDLGIIKSKREEAGFAPEEDGPESGRS 487
Fly 488 LSGLFSIKQVENDTPDEDDDDFDLSLEESGDEKAAPKVSASASDHEATTISPSSLDGVTTEEVRV 552
Fly 553 TTEQTVVSGDPDLLLLKNEDVLKRSKRQGLFDLLGGFGGSGDANKKNKFEVDNMQFYTKQFPYPA 617
Fly 618 FLNDVFKRGLYLAQGVQVAYLLGLVVFVALSVRERIWMRESRNSMLMRSMGLKAHSELVAWALMS 682
Fly 683 FLELCVIFALISGVLYSGGILGYTNWFFMMFYCLSFGLCLISFCYMCTNFFNSANIGAVASALLF 747
Fly 748 FISLCPFIIVLMFD----AKLSVFESFLVDLSF-----------TTAFAKGWGELIRMELQQEGL 797
Fly 798 TVRHLIQVGPARSECAMALLMFLLDLLLYAVI------------GLAYQRY-KKTDNYSFVKVSR 849
Fly 850 SQLDGK-----------------------LGASLVNVSKLY--GSKCAVSNLSLDFARNQVSCLL 889
Fly 890 GRNGAGKSTLIKLLTGQIRQSSGKVLLAGE----------HQVGVCWQDNILIPTLTAREHLQLY 944
Fly 945 AQIKIPPGGSGGVEE--IRSEVAQTLQSLNFG----KHESYPSWQLSGGYRRRLCVAIAFIASPS 1003
Fly 1004 VVILDEPCNGVDAKARKDIWQLIERLRQGRAVIFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDS 1068
Fly 1069 LQRLCTSNYSIRL----------RCADATGVTFVIQK-----------------AQQLLPQTQVT 1106
Fly 1107 ---------HSGAA----DYPHSLTINASYAEHLTPGAVEFLELLQ----------------SQV 1142
Fly 1143 TAGSI-------SDVELTTS-----------------SSLE--QEFEQLNRNGEDAGPRRPASDR 1181
Fly 1182 SGVVAGPA-------MITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALFELCAM---- 1235
Fly 1236 ---------------W-------FVSYRLEDDFD------------------------------- 1247
Fly 1248 -----TVLPLSRSLY----------------------------------------PQ----TAQF 1263
Fly 1264 LSHERATSFSE---KLYPQLRTSCDHLGECRVFNTSQQSYDWVLNSWGEYSERRYGGYGLNGSGA 1325
Fly 1326 ------------------------------------------------TVWYNNKGYHSMMAWLN 1342
Fly 1343 DLNSELLRTTM----NDSESSILTLNEPWKLGFAELSTSSILRQAGDGSMVFILLIAFGLVVASG 1403
Fly 1404 SVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLVMVLGLIVCLVVILMFGMPVFVDRQQLVG 1468
Fly 1469 IIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLIVPLVTMGIILILGVVGDGPAWDDWRH 1533
Fly 1534 ALNQAFLIFPIHALGDGFLELCKNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAALII 1598
Fly 1599 NVLIEWHLLRRLWQRVERLL------DCTYRRE----LDKLGQLKLVNIQSIFKSCVDTGEAVRA 1653
Fly 1654 ENLWLAYRRGHY-AVRNVNFSVQRGECFGLLGKNGAGKSTIFKLLTGQLQPDVGQIYFEQPGI-- 1715
Fly 1716 ---------SYCPQSNPLDPLLTTTECIRFYGRLRGI--RDLDQFLDRVLDTYELRPYKDVQVRN 1769
Fly 1770 LSGGNRRKLTVAVTCCGCTPTVLMDEPTSDMDPVTRDMVYATIEQLLLARRAVVLTSHSVSEIEH 1834
Fly 1835 LCQRVAVLRAGQVIASDSPQRLKSEHG-GYYAVTCFCG------PAQQAILSRSLNQRLPGARDL 1892
Fly 1893 QHYAHSLRFLVRVRSPGSLGDAPLLSELFAILCD--VCVNVARFSLSRCRFETVFERIL-DSSES 1954
Fly 1955 NGSN--GVHKDQ 1964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34120 | NP_001285513.1 | ABC2_membrane_3 | <621..760 | CDD:289468 | 31/138 (22%) |
ABC_subfamily_A | 859..1073 | CDD:213230 | 90/231 (39%) | ||
drrA | 865..1162 | CDD:130256 | 118/396 (30%) | ||
ABC2_membrane_3 | 1230..1601 | CDD:289468 | 109/531 (21%) | ||
Mem_trans | 1436..>1552 | CDD:304621 | 27/115 (23%) | ||
ABC_subfamily_A | 1651..1857 | CDD:213230 | 78/219 (36%) | ||
drrA | 1666..1945 | CDD:130256 | 96/300 (32%) | ||
Abca1 | XP_006537617.1 | rim_protein | 6..2238 | CDD:130324 | 564/2477 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4950 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |