DRSC/TRiP Functional Genomics Resources

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Protein Alignment stg1 and cacng2b

DIOPT Version :9

Sequence 1:NP_001027082.1 Gene:stg1 / 318064 FlyBaseID:FBgn0064123 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001186659.1 Gene:cacng2b / 569855 ZFINID:ZDB-GENE-090624-3 Length:321 Species:Danio rerio


Alignment Length:233 Identity:64/233 - (27%)
Similarity:100/233 - (42%) Gaps:55/233 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 GYLWLITPVAASISVAIVIAALAGPQWLFTEE--KLPNANYNGTA--NFKALDDGAYITKYTKSS 283
            |...|:|.|.|..:.:::..|:....||::..  |:.:.|.|.|:  |.:.:         |.|.
Zfish     7 GVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKIKSTNENETSKKNEEVM---------THSG 62

  Fly   284 LWILCT---TLPGLDADSYNCVKIDYFSNEG-YQPDPHDSTAAIPYTVTKSCPIFL----AAGVF 340
            ||..|.   ...|:      |.:||:|..:. |:.|..:              .||    |:.:|
Zfish    63 LWRTCCLEGNFKGM------CKQIDHFPEDADYEADASE--------------YFLRAVRASSIF 107

  Fly   341 LVISFI-VFLIPTCSHQNNLY------YFSAGILFIVSGLVMLIGLIAYISILKAEIGSKLRPRS 398
            .::|.| :|:...|...:..|      ..||||.|:.:||..:||:|.|||   |..|...:..|
Zfish   108 PILSVILLFMGGLCVAASEFYKSRHNIILSAGIFFVSAGLSNIIGIIVYIS---ANAGDPSKSDS 169

  Fly   399 TLQPALIKVSYGQSFFLFVFGFIVTEFVGVLNIFLFIN 436
            ...    ..|||.||:.....||:.|.||||.:.:||:
Zfish   170 KKN----SYSYGWSFYFGALSFIMAEMVGVLAVHMFID 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stg1NP_001027082.1 PMP22_Claudin 235..429 CDD:304458 55/212 (26%)
cacng2bNP_001186659.1 PMP22_Claudin 6..197 CDD:250157 61/225 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9896
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000345
OrthoInspector 1 1.000 - - otm24542
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.010

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