DRSC/TRiP Functional Genomics Resources

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Protein Alignment stg1 and Cacng3

DIOPT Version :10

Sequence 1:NP_001400987.1 Gene:stg1 / 318064 FlyBaseID:FBgn0288700 Length:1000 Species:Drosophila melanogaster
Sequence 2:NP_062303.2 Gene:Cacng3 / 54376 MGIID:1859165 Length:315 Species:Mus musculus


Alignment Length:299 Identity:76/299 - (25%)
Similarity:115/299 - (38%) Gaps:70/299 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 MTTVNGGYLWLITPVAASISVAIVIAALAGPQWLFTEEKLPNANYNGTANFKALDDGAYITK--- 278
            |...:.|...|||.|.|..:.:::..|:....||::         .|....|:..|.....|   
Mouse     1 MRMCDRGIQMLITTVGAFAAFSLMTIAVGTDYWLYS---------RGVCRTKSTSDNETSRKNEE 56

  Fly   279 -YTKSSLWILCTTLPGLDADSYNCVKIDYFSNEG-YQPDPHDSTAAIPYTVTKSCPIFLAAGVFL 341
             .|.|.||..| .|.|  |....|.|||:|..:. |:.|    ||.......:      |:.||.
Mouse    57 VMTHSGLWRTC-CLEG--AFRGVCKKIDHFPEDADYEQD----TAEYLLRAVR------ASSVFP 108

  Fly   342 VISF-IVFLIPTCSHQNNLY------YFSAGILFIVSGLVMLIGLIAYISILKAEIGSKLRPRST 399
            ::|. ::|....|...:..:      ..||||.|:.:||..:||:|.|||....:.|.:...:| 
Mouse   109 ILSVTLLFFGGLCVAASEFHRSRHSVILSAGIFFVSAGLSNIIGIIVYISANAGDPGQRDSKKS- 172

  Fly   400 LQPALIKVSYGQSFFLFVFGFIVTEFVGVLNIFLFI------------NLQEVSYYSRLPCFSVA 452
                   .|||.||:...|.||:.|.|||:.:.::|            .|.:.|.::|||     
Mouse   173 -------YSYGWSFYFGAFSFIIAEIVGVVAVHIYIEKHQQLRARSHSELLKKSTFARLP----- 225

  Fly   453 NIHAKLKEGQHPLSDSYKRYKQPGITTASQEGLSSAGQG 491
                       |....::|......|......||...:|
Mouse   226 -----------PYRYRFRRRSSSRSTEPRSRDLSPISKG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stg1NP_001400987.1 PMP22_Claudin 235..429 CDD:473919 56/205 (27%)
Cacng3NP_062303.2 PMP22_Claudin 6..196 CDD:473919 63/219 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..253 4/20 (20%)

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