DRSC/TRiP Functional Genomics Resources

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Protein Alignment stg1 and cacng3

DIOPT Version :9

Sequence 1:NP_001027082.1 Gene:stg1 / 318064 FlyBaseID:FBgn0064123 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_002932480.1 Gene:cacng3 / 100488289 XenbaseID:XB-GENE-1010716 Length:317 Species:Xenopus tropicalis


Alignment Length:220 Identity:65/220 - (29%)
Similarity:95/220 - (43%) Gaps:31/220 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 GYLWLITPVAASISVAIVIAALAGPQWLFTEEKLPNANYNGTANFKALDDGAYITK----YTKSS 283
            |...|||.|.|..:.:::..|:....||::         .|....|:.:|.....|    .|.|.
 Frog     7 GVQMLITTVGAFAAFSLMTIAVGTDYWLYS---------RGVCKAKSTNDNETSKKNEEVMTHSG 62

  Fly   284 LWILCTTLPGLDADSYNCVKIDYFSNEG-YQPDPHDSTAAIPYTVTKSCPIF--LAAGVFLVISF 345
            ||..| .|.|  |....|.|||:|..:. |:.|    ||.......::..||  |:.|:......
 Frog    63 LWRTC-CLEG--AFRGMCKKIDHFPEDADYEQD----TAEYLLRAVRASSIFPILSVGLLFFGGL 120

  Fly   346 IVFLIPTCSHQNNLYYFSAGILFIVSGLVMLIGLIAYISILKAEIGSKLRPRSTLQPALIKVSYG 410
            .|.......:::|: ..||||.|:.:||..:||:|.|||....:.|.....:|       ..|||
 Frog   121 CVAASEFYKNKHNV-ILSAGIFFVSAGLSNIIGIIVYISANAGDPGQSDSKKS-------NYSYG 177

  Fly   411 QSFFLFVFGFIVTEFVGVLNIFLFI 435
            .||:.....||:.|.||||.:.:||
 Frog   178 WSFYFGALSFIIAEMVGVLAVHMFI 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stg1NP_001027082.1 PMP22_Claudin 235..429 CDD:304458 55/200 (28%)
cacng3XP_002932480.1 PMP22_Claudin 6..197 CDD:334271 62/213 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10462
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000345
OrthoInspector 1 1.000 - - otm48588
Panther 1 1.100 - - O PTHR12107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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