DRSC/TRiP Functional Genomics Resources

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Protein Alignment stg1 and cacng7b

DIOPT Version :10

Sequence 1:NP_001400987.1 Gene:stg1 / 318064 FlyBaseID:FBgn0288700 Length:1000 Species:Drosophila melanogaster
Sequence 2:XP_073782032.1 Gene:cacng7b / 100003278 ZFINID:ZDB-GENE-100921-51 Length:348 Species:Danio rerio


Alignment Length:470 Identity:107/470 - (22%)
Similarity:173/470 - (36%) Gaps:168/470 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 MTTVNGGYLWLITPVAASISVAIVIAALAGPQWLFTEEKLPNANYNGTANFK-ALDDGAYITKYT 280
            |::.:...|.|::.|..:..:.:|..|:|...||..||.:. ...|.|.:.| ||..|       
Zfish     3 MSSCSSRALTLLSTVFGACGLLLVGVAVATDYWLLMEEGIV-LQQNQTVDVKMALHSG------- 59

  Fly   281 KSSLWILCTTLPGLDADSYNCVKIDYFSNEGYQPD---PHDSTAAIPYTVTKSCPIFLAAGVFLV 342
               ||.:| .:.|  .:...||..:||:    :|:   ..::||.|...|..:.|..:.:.:|:.
Zfish    60 ---LWRVC-FIAG--TEKGRCVASEYFT----EPEIEITTENTANILKMVRTATPFPMVSLLFVF 114

  Fly   343 ISFIVFLIPTCSHQNNLYYFSAGILFIVSGLVMLIGLIAYISILKAEIGSKLRPRSTLQPALIKV 407
            .:||:..:.....|..:..|.:||.||:|||.:::||:.|||.:..|:.:  |||...|  ....
Zfish   115 TAFIISNVGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMN--RPREPEQ--FFNY 175

  Fly   408 SYGQSFFLFVFGFIVTEFVGVLNIFLFINLQEVSYYSRLPCFSVANIHAKLKEGQHPLSDSYKRY 472
            .||.||......|::.|..||::::||:                                  |||
Zfish   176 RYGWSFAFAASSFLLKEGAGVMSVYLFM----------------------------------KRY 206

  Fly   473 KQPGITTASQEGLSSAGQGQQGHQSHHPTHQPHPTAQPPHGILRSGNSRLHQVYDAGRGHPGMTG 537
                   |.:|                 .::||||...|         ||.:..|          
Zfish   207 -------AEEE-----------------MYRPHPTLYRP---------RLSEGSD---------- 228

  Fly   538 QIGHSGQTQTLPGACRKHPNAGSNLNLYLHNDLERRFYFEKPAVSKCNLHSRSFAKSLNELCTDT 602
               :|||                    |||.:.     :..|          ..|:|.:|:.:|.
Zfish   229 ---YSGQ--------------------YLHPET-----WPPP----------QRARSASEISSDI 255

  Fly   603 SVSSTHVP-------------APLLPSAADP-------LPAPALFADLPQEFPL---TRSVSTAT 644
            |:..|..|             :|.:.:|:.|       ||:|...|..|...||   ....:.|:
Zfish   256 SIQLTQNPQHPSKASGQQGTSSPGITAASSPASGTGYQLPSPGSAAPYPHNHPLHPGAHGPAAAS 320

  Fly   645 EIYPASSSAPAPPSA 659
            :..|.|    |||:|
Zfish   321 QAMPMS----APPAA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stg1NP_001400987.1 PMP22_Claudin 235..429 CDD:473919 56/197 (28%)
cacng7bXP_073782032.1 None

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