DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ogg1 and AT1G19485

DIOPT Version :10

Sequence 1:NP_572499.2 Gene:Ogg1 / 31806 FlyBaseID:FBgn0027864 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_564086.1 Gene:AT1G19485 / 838534 AraportID:AT1G19485 Length:815 Species:Arabidopsis thaliana


Alignment Length:231 Identity:54/231 - (23%)
Similarity:77/231 - (33%) Gaps:72/231 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LCSQ------NNNIKRISSMI----EWFCATFGTK-IGHFNGADAYTFPTINRFHDIPCEDLNAQ 197
            ||.:      .|:|..:||.:    ||....|..| ...:|.|:....|          :|:|:|
plant    28 LCGEANADIDENDINILSSSVTFLREWRHYNFEPKSFAFYNEAEKNHQP----------KDINSQ 82

  Fly   198 LRAAKFGYRAKFI------AQTLQEIQKK-----GGQNWFISLKSMPFEKAREELTLLPGIGYKV 251
            ........||..:      :.:..||.|.     ||..|           |.|....:.|.....
plant    83 TLPQFSSARAPKVKIHDDESSSSGEISKDFVMHVGGSVW-----------AMEWCPRVHGNPDAQ 136

  Fly   252 ADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQK--------NVT-KKIYEEVSKHFQKLHG 307
            |.|..|....|    |.|.:.::|.    :| |.|:.        |.| ||...:||...:||.|
plant   137 AKCEFLAVATH----PPDSYSHKIG----IP-LIGRGIIQIWCIINATCKKDSGQVSDKGKKLTG 192

  Fly   308 KYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKK 343
            |          |......:.|.|.. .||...:|:|
plant   193 K----------SRKQPSGETTETTE-PKKPRGRPRK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ogg1NP_572499.2 ogg 33..324 CDD:211589 48/210 (23%)
AT1G19485NP_564086.1 WD40 354..623 CDD:475233
WD40 repeat 359..405 CDD:293791
WD40 <432..559 CDD:441893
WD40 repeat 440..483 CDD:293791
WD40 repeat 489..531 CDD:293791
WD40 repeat 536..593 CDD:293791
WD40 repeat 595..630 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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