DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and SGSM2

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_011522403.1 Gene:SGSM2 / 9905 HGNCID:29026 Length:1103 Species:Homo sapiens


Alignment Length:1258 Identity:493/1258 - (39%)
Similarity:673/1258 - (53%) Gaps:300/1258 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GNADGSDYKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLC--------------------- 47
            |:|:.: .||:|:.:|||||||:||||||:|:|||:||.:.:||                     
Human     2 GSAEDA-VKEKLLWNVKKEVKQIMEEAVTRKFVHEDSSHIIALCAADPHQGLTRCQTPFTVQGNG 65

  Fly    48 -------------------------GAVEACLSQGLRRRALGLFKTSSTTALLHKIAKSCPEAEH 87
                                     .||||||...|||||.|..::....||..|:.|:||.|..
Human    66 SDKMDRVSAAGAYILLGRQTGNKCASAVEACLLHQLRRRAAGFLRSDKMAALFTKVGKTCPVAGE 130

  Fly    88 ISKLVQEI-EASDPSKRSSSSSDSFQRPPMLKKSSSNSMSTGTNAAASTSSASASISVSASTSSM 151
            |...|||: :.::..|.|..|.::.:|..                           |.|....::
Human   131 ICHKVQELQQQAEGRKPSGVSQEALRRQG---------------------------SASGKAPAL 168

  Fly   152 SLASMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGSILSSLLVGPCALEFTRAK 216
            |..::|::|:|.||.||.|.|:::||..|.|.:|::::|:||..:|.||:||||||||||:|:.|
Human   169 SPQALKHVWVRTALIEKVLDKVVQYLAENCSKYYEKEALLADPVFGPILASLLVGPCALEYTKLK 233

  Fly   217 TADHYWTDPHADELVQRHRI-SSCRRSSSTCSRPAIINFKRSLNTSSDEAGTGSFKSIASASVAK 280
            |||||||||.|||||||||| ....|..|...|||:...||.        .:||......|:.|:
Human   234 TADHYWTDPSADELVQRHRIRGPPTRQDSPAKRPALGIRKRH--------SSGSASEDRLAACAR 290

  Fly   281 DYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLTIKWTPNQLMNGYTEAEEAE 345
            :.|||||||::..||||||:|.|.||:..|.:||||||||..::||:||||||||||.....|  
Human   291 ECVESLHQNSRTRLLYGKNHVLVQPKEDMEAVPGYLSLHQSAESLTLKWTPNQLMNGTLGDSE-- 353

  Fly   346 DIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQRPPIHFPEGGHMQQFLSCLE 410
             ::|..:|.|||.:...::|.:||||.:   ||||::||.|||:||||:|||:|||:..||||||
Human   354 -LEKSVYWDYALVVPFSQVVCIHCHQQK---SGGTLVLVSQDGIQRPPLHFPQGGHLLSFLSCLE 414

  Fly   411 TGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILPSV-MESVDE-TPIDYVFRIVSKS-RHEEF- 471
            .||||.|||:||||:|:|.||:|  |:..:|..:.|| ||.:.. ...||||||:... |||.. 
Human   415 NGLLPRGQLEPPLWTQQGKGKVF--PKLRKRSSIRSVDMEEMGTGRATDYVFRIIYPGHRHEHIT 477

  Fly   472 ----------AAT-----------HSILDFVRS------------------------------TP 485
                      ||:           |::|..:.|                              .|
Human   478 INYHHLAASRAASVDDDEEEEDKLHAMLSMICSRNLTAPNPMKDAGDMIEMQGFGPSLPAWHLEP 542

  Fly   486 RRAQLSSCSTTGSSDC-----SNKSLSIDQFPMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMR 545
            ..:|.|||.:..||..     |:.|...|:.|                        :.::|.:|:
Human   543 LCSQGSSCLSCSSSSSPHATPSHCSCIPDRLP------------------------LRLLCESMK 583

  Fly   546 RQIISRAFYGWLAYCRHLSTVRTHLSGLVHGRITPEMK--ADEEGLTKERWQLLNVNGVLENATE 608
            |||:|||||||||:||||||||||||.|||..:.|..:  ....||||:.|.....:.......|
Human   584 RQIVSRAFYGWLAHCRHLSTVRTHLSALVHHSVIPPDRPPGASAGLTKDVWSKYQKDKKNYKELE 648

  Fly   609 FYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREK 673
            ..|.||:||::.|:|::|||:|||||.||.:.::.::.|......|:..::||.|.:.:|:|||:
Human   649 LLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAEWKACEVVVRQRER 713

  Fly   674 EKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAEC 738
            |.......|.||||:.  |..|:.. :.....:.|:||..:.|:..|...:.::.:.:.:|:|..
Human   714 EAHPATRTKFSSGSSI--DSHVQRL-IHRDSTISNDVFISVDDLEPPEPQDPEDSRPKPEQEAGP 775

  Fly   739 AVSGNHLTVKPIPRAMKTSTDSGHVDESFN-ELDEPDEEDNKQKQQQDEKISESESKLPDYRKLE 802
            ...|..:                 |::..: |.|.||                  |.||..|...
Human   776 GTPGTAV-----------------VEQQHSVEFDSPD------------------SGLPSSRNYS 805

  Fly   803 EQINQEPSCSASTASSYE---------TVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAV 858
            .....:.|.....:..:|         :.|||.                  :|..|:.|.|....
Human   806 VASGIQSSLDEGQSVGFEEEDGGGEEGSSGPGP------------------AAHTLREPQDPSQE 852

  Fly   859 RPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACASP 923
            :|                                      ||||       ::|.::..:.||: 
Human   853 KP--------------------------------------QAGE-------LEAGEELAAVCAA- 871

  Fly   924 ASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGM 988
                  .|:.|||:...||||||:|||||||||||||...||::||:|:.:||||||||||:|||
Human   872 ------AYTIELLDTVALNLHRIDKDVQRCDRNYWYFTPPNLERLRDVMCSYVWEHLDVGYVQGM 930

  Fly   989 CDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGD 1053
            |||:|||||..|::.|:||||..||:||.:|||:|||||.|||||||||||||||:::||..|||
Human   931 CDLLAPLLVTLDNDQLAYSCFSHLMKRMSQNFPNGGAMDTHFANMRSLIQILDSELFELMHQNGD 995

  Fly  1054 YTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDF 1118
            |||||||||||||||||||:|:||||.|||||||:||:|.|||||:||||:|.||:||..|:|||
Human   996 YTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWAARHISSEHFVLFIALALVEAYREIIRDNNMDF 1060

  Fly  1119 TDVIKFFNEMAERH-NAQSVLQL 1140
            ||:|||||.:   | :.|:||.:
Human  1061 TDIIKFFNAL---HVSPQNVLSI 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855 64/219 (29%)
PH_RUTBC 292..466 CDD:275431 95/175 (54%)
TBC 923..1087 CDD:214540 116/163 (71%)
SGSM2XP_011522403.1 RUN 90..235 CDD:280855 62/171 (36%)
PH_RUTBC 302..470 CDD:275431 95/175 (54%)
TBC <885..1053 CDD:214540 127/167 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 297 1.000 Domainoid score I1464
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48923
OrthoDB 1 1.010 - - D171826at2759
OrthoFinder 1 1.000 - - FOG0002045
OrthoInspector 1 1.000 - - mtm8482
orthoMCL 1 0.900 - - OOG6_103962
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3416
SonicParanoid 1 1.000 - - X1347
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.820

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