DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and AT5G54780

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_200289.2 Gene:AT5G54780 / 835568 AraportID:AT5G54780 Length:432 Species:Arabidopsis thaliana


Alignment Length:610 Identity:109/610 - (17%)
Similarity:192/610 - (31%) Gaps:276/610 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 LTKERWQ-LLNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKH 652
            |:..:|| .....|.|:......| :..||:.|.:|.|||.:|||.|...||.|:|::       
plant    35 LSVRKWQAAFTTEGFLDIGKTLSR-IQRGGIHPSIRGEVWEFLLGCYDPKSTFEEREQ------- 91

  Fly   653 YYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDI 717
                           ::||.:                                            
plant    92 ---------------IRQRRR-------------------------------------------- 97

  Fly   718 SDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPDEEDNKQKQ 782
                 |::...:::.:|......||..:|...|       |:.|.                    
plant    98 -----LQYASWKEECKQMFPVIGSGGFITAPVI-------TNKGE-------------------- 130

  Fly   783 QQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEYLSAD 847
                         |.|..:   :.||.:..|:.:..::                           
plant   131 -------------PIYDPI---VLQETNLGANGSDFFK--------------------------- 152

  Fly   848 DLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVNMDA 912
            ||                                     |:.|    ||:::             
plant   153 DL-------------------------------------ASRG----PLDQK------------- 163

  Fly   913 LQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRN-YWYFANENLDKLRNVISTYV 976
                                   :.|:.|.||:|..||.|.||. .:|...|||.||.::::.|.
plant   164 -----------------------VIQWLLTLHQIGLDVNRTDRTLVFYEKKENLSKLWDILALYA 205

  Fly   977 WEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGG---AMDMHFANMRSLIQ 1038
            |...||||.|||.||.:|::::.:||:.::.||.:||.|:..||...|   .::....::.|:.|
plant   206 WIDNDVGYCQGMSDLCSPMIMLLEDEADAFWCFERLMRRLRGNFRDTGRSVGVEAQLTHLASITQ 270

  Fly  1039 ILDSEMYDLMD--SNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKH------------ 1089
            |:|.:::..::  ..|||   .|..|..::.|:||..:.|....||::||.::            
plant   271 IIDPKLHHHLEKLGGGDY---LFAIRMIMVQFRREFSFCDSLYLWEMMWALEYDPEMYSLYEEPQ 332

  Fly  1090 ---------------------------------IASGHFVL--FLALALLETYRDIILSNSMDFT 1119
                                             .|.|...:  ||..::|:.....:::.:....
plant   333 FEGERIEGSSKGKPKSINQCGKYERENMKNGGKSAEGPLPISVFLVASVLKDKSSKLMTEARGLD 397

  Fly  1120 DVIKFFNEMAERHNAQSVLQLARSL 1144
            ||:|..|::....:|:.....|..|
plant   398 DVVKILNDITGNLDAKKACTGAMKL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 54/169 (32%)
AT5G54780NP_200289.2 TBC 148..317 CDD:214540 59/275 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.