DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and AT5G41940

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_199009.2 Gene:AT5G41940 / 834199 AraportID:AT5G41940 Length:549 Species:Arabidopsis thaliana


Alignment Length:586 Identity:122/586 - (20%)
Similarity:216/586 - (36%) Gaps:187/586 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 ENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIV 668
            :...:|.:.|..|||.|.:|.||||:|||.|...|..|:|                     |:|.
plant   106 DGGVKFLKKVRSGGVHPSIRPEVWPFLLGVYDLKSNKEER---------------------DSIR 149

  Fly   669 QQR--EKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQ 731
            |.:  |.|...|...::                        :|.:|::.|         .::..|
plant   150 QLKLTEYENLRRQCREI------------------------HERYENVCD---------SKETAQ 181

  Fly   732 QQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLP 796
            .....:..|..:| .::.:..:.:|.|    ||||        |:.|.:...|||...:|:....
plant   182 SSNTEDSQVLESH-DIEEVESSTRTIT----VDES--------EKLNSESIMQDENCEKSDVTTE 233

  Fly   797 DYRKLE------EQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDE 855
            |....:      |:....|..:.....|:.||...:....|:|..:|..:             ||
plant   234 DAAGNDSDSTNPEETETSPFLANEEVESHNTVNQEKEISSPSSKPKSQAA-------------DE 285

  Fly   856 DAVRPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVNMDALQ------ 914
            |.                    ::.|:|.                       :.:||::      
plant   286 DF--------------------MSTWQRI-----------------------IRLDAVRANDEWV 307

  Fly   915 --QPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVW 977
              .|..|..|...:.|      :..|.|||.:   ..::.|  ..::.|     :|..::..|..
plant   308 PYSPTQAAVSETKARG------IAIQVGLNDY---DHLEPC--RIFHAA-----RLVGILEAYAV 356

  Fly   978 EHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMD-----MHFANMRSLI 1037
            ...::||.|||.||::||:.:.:|:.|::.||...|.:...||    .:|     ...:.:..:|
plant   357 YDPEIGYCQGMSDLLSPLIAVMEDDVLAFWCFVGFMSKARHNF----RLDEVGIRRQLSMVSKII 417

  Fly  1038 QILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAK-HIASG-------- 1093
            :..|..:|..:: |.:....:|.||..::.|:|||.::.....|||:||.: .|.:|        
plant   418 KFKDIHLYRHLE-NLEAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRTGIAKATWGR 481

  Fly  1094 ---------HFVLF-LALALLETYRDIILSNS-MDFTDVIKFFNEMAERHNAQSVLQLARSLVLQ 1147
                     ..:|: :|.::|:..:.||...| ||  :::|..|.||...:...:|..|..||:.
plant   482 IRLRAPPTEDLLLYAIAASVLQRRKTIIEKYSGMD--EIMKECNSMAGHLDVWKLLDDAHDLVVN 544

  Fly  1148 L 1148
            |
plant   545 L 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 41/168 (24%)
AT5G41940NP_199009.2 TBC <325..466 CDD:214540 40/155 (26%)
Blue background indicates that the domain is not in the aligned region.

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