DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and AT2G20440

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_179634.2 Gene:AT2G20440 / 816563 AraportID:AT2G20440 Length:425 Species:Arabidopsis thaliana


Alignment Length:290 Identity:73/290 - (25%)
Similarity:133/290 - (45%) Gaps:55/290 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   905 GAG--VNMDALQQPKSACASPASSNGG-----VYSSELLEQFGLNLHRIEKDVQRCDRNYWYFAN 962
            |:|  |.|..:|:..:.....:..|.|     ..:.|.:.|:.|:||:|..||.|.||...::.|
plant   122 GSGKYVTMAVVQENGNPIDESSVENQGWIVKNTVTDERVLQWMLSLHQIGLDVARTDRYLCFYEN 186

  Fly   963 E-NLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENF---PSG 1023
            : |..||.:|::.|.|.:||:||:|||.|:.:|::::||||..::.||.:.|.|:.|||   .:.
plant   187 DRNQSKLWDVLAIYTWLNLDIGYVQGMNDICSPMIILFDDEGDAFWCFERAMRRLRENFRATATS 251

  Fly  1024 GAMDMHFANMRSLIQILDSEMYD-LMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWA- 1086
            ..:......:..:|:.:|..::. |.|.:|.  .:.|..|..::.|:||..:.|....||::|| 
plant   252 MGVQTQLGVLSQVIKTVDPRLHQHLEDLDGG--EYLFAIRMLMVLFRREFSFLDALYLWELMWAM 314

  Fly  1087 ---------------------------------AKHIASGH-------FVLFLALALLETYRDII 1111
                                             .|:|.||.       ..:|:..::|:|....:
plant   315 EYNPTMFATYEELENRNNAASDPKLLKRYGKFERKYINSGQNEQHRNTLAVFVVASVLQTKNKRL 379

  Fly  1112 LSNSMDFTDVIKFFNEMAERHNAQSVLQLA 1141
            |..:....||::...::|...:|:...:.|
plant   380 LKEAKGLDDVVQILGDIAGNLDAKKACKEA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 55/207 (27%)
AT2G20440NP_179634.2 TBC <166..321 CDD:214540 50/156 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.