DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and sgsm2

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_003200084.2 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1056 Species:Danio rerio


Alignment Length:1228 Identity:523/1228 - (42%)
Similarity:684/1228 - (55%) Gaps:249/1228 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GNADGSDYKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLCGAVEACLSQGLRRRALGLFKT 68
            |:....::||:|:.:||:||||:||||||||:|||:||.:.:||.::|||||..|:|||.|..::
Zfish     2 GSTTDEEFKEKLLWNVKREVKQIMEEAVTKKFVHEDSSHIIALCSSIEACLSHLLKRRAAGFLRS 66

  Fly    69 SSTTALLHKIAKSCPEAEHISKLVQEIEASDPSKRSSSSSDSFQRPPMLKKSSSNSMSTGTNAAA 133
            ....||..||.|.......|.:.|||              ...|:..:.:::.|....:.....:
Zfish    67 DKIAALFTKIGKVNTTVSEICRKVQE--------------QLQQQAEITRRTQSTGQESLRRQGS 117

  Fly   134 STSSASASISVSASTSSMSLASMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGS 198
            ||..|...:|..|         :|::|:|.||:||.|.||::|:|.|||.:|:|::|:.||.:|.
Zfish   118 STGRAPQPLSAQA---------IKHIWVRTALFEKVLDKIVQYIVDNASKYYEREALMHDSVFGP 173

  Fly   199 ILSSLLVGPCALEFTRAKTADHYWTDPHADELVQRHRISSCRRSS--STCSRPAIINFKRSLNTS 261
            ||::|||||||||:|:.||:||:||||.|:||||||||....|..  |...|||:...||.    
Zfish   174 ILAALLVGPCALEYTKLKTSDHFWTDPSANELVQRHRIHGAHRGQEVSPGRRPALGIRKRQ---- 234

  Fly   262 SDEAGTGSFKSIASASVAKDYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLT 326
                .:||......|:.|::||||||||::..||||||||.|.||...|.:.|||||||..:|||
Zfish   235 ----SSGSMSEDKFAASAREYVESLHQNSRVHLLYGKNNVLVQPKKDMEVLRGYLSLHQTAETLT 295

  Fly   327 IKWTPNQLMNGYTEAEEAEDIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQR 391
            :|||||||:|| |..:  .|::|..:|.|||.:.:.:||.:||||.  .|.|||::||.|||:||
Zfish   296 LKWTPNQLING-TLGD--CDLEKSIYWDYALTVPLRQIVCIHCHQR--PDCGGTLVLVSQDGIQR 355

  Fly   392 PPIHFPEGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMF--LWPRSMRRRILPSVMESVDET 454
            ||:|||.|||:..|||||||||||.|||:||||||||.||:|  |..|:...|::....:..|:.
Zfish   356 PPLHFPPGGHLLAFLSCLETGLLPRGQLEPPLWSQRGKGKVFPKLRKRNSTARLVDQDGDGEDQI 420

  Fly   455 PIDYVFRIVSKS-RH----------------------EEFAATHSILDFVRS------------- 483
            ..|||||||... ||                      ||....|:::..:.|             
Zfish   421 AADYVFRIVYPGHRHDSITINYHHSTGSRAPSLDDDEEEEDRLHAMISMICSRNLTDPNVMKDHG 485

  Fly   484 --------------------TPRRAQLSSCSTTGSSDCSNKSLSI--------DQFPMESPLILQ 520
                                |...:...||||.|    ||.|:.:        |:.|        
Zfish   486 DLMEMQGFGGSPLSWQQGECTSHMSSCLSCSTGG----SNASVELPASCTCMHDRIP-------- 538

  Fly   521 QQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGLVHGRITPEMKAD 585
                            ::|:|..|:|||:||||||||||||||||||||||.||:..|.|..|..
Zfish   539 ----------------LKMLCQNMKRQIVSRAFYGWLAYCRHLSTVRTHLSALVNHNIVPPDKPC 587

  Fly   586 EE--GLTKERWQLLNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDE 648
            |.  ||:|:.|.....:.......|..||||:|||:.|:|:||||:|||||.||...::..:.||
Zfish   588 EASGGLSKDVWSKYQKDCKNYKELELLRLVYYGGVEHEIRKEVWPFLLGHYKFGMDKKNMAQIDE 652

  Fly   649 TCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFED 713
            .....|:..|.||.|.:.||:|||||..:...||||||| |.:...:|.  :.....:.||||..
Zfish   653 KITARYQQVMREWKACEVIVKQREKEMQSAIFAKLSSGS-SIDSHVLRL--IHRDSTISNEVFMS 714

  Fly   714 ISDISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPDEEDN 778
            : |..|.|.           |...|..|...||....|..:...      :....|.|.||    
Zfish   715 V-DEPDAGG-----------QDTSCEDSTPTLTTVVTPAMLAPD------ERPLVEFDSPD---- 757

  Fly   779 KQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEY 843
                          |.||..|            :.|.||.:.                .::|   
Zfish   758 --------------SGLPSSR------------NYSVASGHS----------------QIMS--- 777

  Fly   844 LSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAG- 907
             |.||.|..::                           :.:|...       ||||    ||.| 
Zfish   778 -SIDDGQSMEE---------------------------DTTPTGG-------LEEQ----GGRGS 803

  Fly   908 VNMDALQQPKSACASPASSNG-----GVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDK 967
            ::.|.|........:.:||.|     ..|:.|||:...||||||:||||||||||:||.:.||:|
Zfish   804 LSEDKLCSQLDKLTTTSSSEGTAPSFSSYTIELLDTVALNLHRIDKDVQRCDRNYYYFTSSNLEK 868

  Fly   968 LRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFAN 1032
            |||::.:||||||::||:||||||:|||:||.|||.|:||||.:||.||.:|||:|||||.||||
Zfish   869 LRNIMCSYVWEHLEIGYVQGMCDLLAPLMVILDDECLAYSCFTQLMRRMSQNFPTGGAMDTHFAN 933

  Fly  1033 MRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVL 1097
            |||||||||||:::||..||||||||||||||||||||||:|:||||.|||||.|..|:|.||||
Zfish   934 MRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWVAPRISSKHFVL 998

  Fly  1098 FLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSLVLQLQMIIENK 1155
            |:||||:|.||||||.|:|||||:|||||||||||:.|.:|::||.||.::|.:||||
Zfish   999 FIALALVEVYRDIILDNNMDFTDIIKFFNEMAERHDVQHILRMARELVHKVQTLIENK 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855 62/172 (36%)
PH_RUTBC 292..466 CDD:275431 99/175 (57%)
TBC 923..1087 CDD:214540 119/168 (71%)
sgsm2XP_003200084.2 RUN 43..189 CDD:308412 60/168 (36%)
PH_RUTBC 262..432 CDD:275431 99/174 (57%)
TBC <844..1013 CDD:214540 127/168 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 294 1.000 Domainoid score I1468
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 942 1.000 Inparanoid score I333
OMA 1 1.010 - - QHG48923
OrthoDB 1 1.010 - - D171826at2759
OrthoFinder 1 1.000 - - FOG0002045
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103962
Panther 1 1.100 - - O PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1347
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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