DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and GRTP1

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001273661.1 Gene:GRTP1 / 79774 HGNCID:20310 Length:344 Species:Homo sapiens


Alignment Length:271 Identity:66/271 - (24%)
Similarity:109/271 - (40%) Gaps:44/271 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   895 PLEEQAG---ESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRN 956
            |||.:|.   ...||...||              .|.|.| .:||:  |....|:| |..|.|.|
Human    70 PLEHRARVWMVLSGAQAQMD--------------QNPGYY-HQLLQ--GERNPRLE-DAIRTDLN 116

  Fly   957 YWYFANENLDK---------LRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKL 1012
            ..:..|....|         |.||:..|...:..|||.|||..:...|::|.::|..|:.....|
Human   117 RTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDAL 181

  Fly  1013 MERMIENFPSGGAMDMHFAN--MRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYD 1075
            :.|::.::.|...:.:....  :..|::.....:..||:..| ........|||:..|...|..:
Human   182 VGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLG-VLWTLLVSRWFICLFVDILPVE 245

  Fly  1076 DVFATWEVIWAAKHIASGHFVLF-LALALLETYRDIIL--SNSMDFTDVIKFFNE---MAERHNA 1134
            .|...|:.::     ..|..::| :||.|::.::::||  ::..|..|..|...:   :.|.|..
Human   246 TVLRIWDCLF-----NEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTF 305

  Fly  1135 QSVLQLARSLV 1145
            ..|...||..|
Human   306 MQVCGAARGSV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 42/174 (24%)
GRTP1NP_001273661.1 TBC 65..278 CDD:214540 55/231 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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