DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and Tbc1d13

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_666364.1 Gene:Tbc1d13 / 70296 MGIID:2385326 Length:400 Species:Mus musculus


Alignment Length:377 Identity:79/377 - (20%)
Similarity:137/377 - (36%) Gaps:87/377 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   801 LEEQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPA 865
            |.|.|.|.....|:.....|.|...:....||.|:|   ...|...:::.|..|:|..|..|   
Mouse    74 LREMIIQPGIAKANMGVFREDVTFEDHPLNPNPDSR---WNTYFKDNEVLLQIDKDVRRLCP--- 132

  Fly   866 AAAVIITKASVDITNWERSPK---------------AAEGDQMSPLEEQAGESGGAGVNMDALQQ 915
                       ||:.::|:.:               ..:..:.:.|:.|......:||...:...
Mouse   133 -----------DISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPH 186

  Fly   916 PKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHL 980
            ..||   |::.|    ..|:|.. |...|             |       :.:..::..|...:.
Mouse   187 KNSA---PSALN----EYEVLPN-GCEAH-------------W-------EVVERILFIYAKLNP 223

  Fly   981 DVGYMQGMCDLVAPLLVIF----------DDESLSYSCFCKLMERMIENF-----PSGGAMDMHF 1030
            .:.|:|||.::|.||...|          ..|:.::.||..||..:.:||     .|...:....
Mouse   224 GIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKM 288

  Fly  1031 ANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGH- 1094
            ..:.|.::..|.|:|..:........| |.:||..|...:|.:..||...|:.::     |.|: 
Mouse   289 EKVYSTLKDKDVELYLKLQEQSIKPQF-FAFRWLTLLLSQEFLLPDVIRIWDSLF-----ADGNR 347

  Fly  1095 --FVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSL 1144
              |:|.:..|:|...|:.:|..  |||..::...:.......| :||.|:.|
Mouse   348 FDFLLLVCCAMLILIREQLLEG--DFTVNMRLLQDYPITDVCQ-ILQKAKEL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 37/178 (21%)
Tbc1d13NP_666364.1 TBC 32..367 CDD:214540 70/343 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.