DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and tbc1d9

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_692034.2 Gene:tbc1d9 / 563578 ZFINID:ZDB-GENE-060810-33 Length:1248 Species:Danio rerio


Alignment Length:725 Identity:144/725 - (19%)
Similarity:249/725 - (34%) Gaps:205/725 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 VRTHLSGLVHGRITPEMKA------DEEGLTKE---RWQLLNVNGVLENATEFYRLVYFGGVQPE 621
            :.|.:.|.:.|.|....|:      |:....||   :::.|.|....|....:|...|:.|..| 
Zfish   108 ITTFVKGKIQGIIAEYNKSHDIKEDDDTDKFKEAIAKFRKLFVMPEEEKLVNYYSCSYWKGKVP- 171

  Fly   622 LRQEVWPYL-LGHYAFGS---------------TTE----------DRKKQDETC-KHYYETTMS 659
              ::.|.|| :.|..|.|               .|:          |..:....| :|.:...::
Zfish   172 --RQGWLYLSINHICFYSYLLGKEVKLVVRWADVTQLEKSATLLLPDMVRVSTRCSEHVFSVFLN 234

  Fly   660 --------EWLAVDAIVQQREKE--KTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDI 714
                    |.||..|:.|..:.:  :..|::.||...|........|..|..|..:....:|.  
Zfish   235 INETFKLMEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFR-- 297

  Fly   715 SDISDPGDLEFDEQQQQQQQQAECA---------------VSGNHL--TVKP-------IPRAMK 755
                .|.|.:.|       ...:|.               ||.|::  |.|.       ||....
Zfish   298 ----LPKDEKLD-------GHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETVCSLIIPLREV 351

  Fly   756 TSTDSGHVDESFNELDEPDEEDNKQK---------------QQQDEKISESESKLPDYRKLEEQI 805
            |..:..   :|.|.|..|.....|.|               |:..:.:.::.||:...|::    
Zfish   352 TIVEKA---DSSNVLPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQQTTSKIYFEREI---- 409

  Fly   806 NQEPSCSASTASSYETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVI 870
                  :.|.:||.:.|...:......|..||.|..|..|.....|.|:    |.|....|...:
Zfish   410 ------TGSLSSSDDEVYSQQGSVLSCSPQRSALVSEGESERQFNLNDN----RVPTATQALMTM 464

  Fly   871 ITKASVDITNWERSPKAAEGDQMSPLEEQAGESG----GAGVNMDALQQPK-------------- 917
            ..:.|.:    |.:||.|:    ..|:|||.::.    |.||.|....:.|              
Zfish   465 YRRRSPE----EFNPKLAK----EFLKEQAWKNHFTEYGQGVCMYRTDKTKDLVLQGIPENMRGE 521

  Fly   918 -----SACASPASSNGGVYSSELLE----QFGLNLHRIEKDVQRCDRNYWYFANE-NLDKLRNVI 972
                 |...:..:::.|.| .:|:|    ::.|....||:|:.|....:..|.|| .:..||.|:
Zfish   522 LWLLFSGAINEMATHPGYY-EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVL 585

  Fly   973 STYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPS----GGAMDMHFANM 1033
            :.|.:.:.::||.|.| ::|..:|:::..|..::.....:.|||:.::.:    |..:|.  ...
Zfish   586 TAYAFRNPNIGYCQAM-NIVTSVLLLYAKEEEAFWLLVAMCERMLPDYYNTRVVGALVDQ--GVF 647

  Fly  1034 RSLIQILDSEMYDLMDSNGDYTHFYFCYRWFL------LDFKRELVYDDVFATWEVIWAAKHIAS 1092
            ..|..:...::||.|.:.|..:  .....|||      :.|:..:|..|.|           ...
Zfish   648 EELAHVHVPQLYDCMQALGVIS--TISLSWFLTLFLSVMPFESAVVVVDCF-----------FYE 699

  Fly  1093 GHFVLF-LALALLET--------------------YRDIILSNSMDFTDV---IKFFNEMAERHN 1133
            |..|:| |||::|:.                    |.|.:.:.......:   .....:..|.|.
Zfish   700 GIKVIFQLALSVLDANIHQLLGCKDDGEAMTILGRYLDSVTNKDSTLPPIPHLHSLLTDNGEPHP 764

  Fly  1134 AQSVLQLARS 1143
            ...:.:|.||
Zfish   765 EVDIFKLVRS 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 40/178 (22%)
tbc1d9XP_692034.2 PH-GRAM1_TCB1D9_TCB1D9B 154..252 CDD:275420 19/100 (19%)
PH-GRAM2_TCB1D9_TCB1D9B 301..396 CDD:270161 18/104 (17%)
TBC 510..720 CDD:214540 48/226 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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