DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and tbc1d2

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_689604.6 Gene:tbc1d2 / 561110 ZFINID:ZDB-GENE-140106-100 Length:926 Species:Danio rerio


Alignment Length:844 Identity:140/844 - (16%)
Similarity:275/844 - (32%) Gaps:294/844 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 VSKSRHEEFAATHSILDFVRSTPRRAQLSSCSTTGSSDCSNKSLSIDQFP--------------- 512
            :.:::..:..|.|      :||||...|::.||..:::|....|.:.:.|               
Zfish   147 LKRAQFRDQQAEH------QSTPRPDSLTTESTPPANNCPANFLPMVKTPSGLVGEEAASLPAPG 205

  Fly   513 --------MESPLILQQ------QQQQQQQLLQ---------------AQSTSIEMVCSTMRRQI 548
                    ::.|||..|      :.:|.|::.|               :..||..:|.:|...|.
Zfish   206 LNNPLNMSIKHPLIELQNTMHSFRNRQSQEIRQSVFHIDDPGDTQKTTSPKTSTLVVPATTSYQA 270

  Fly   549 ISRAFYGWLAYCR--HLSTVRTHLSGLVHGRITPEMKADEEGLTKERWQLLNVNGVLENATEFYR 611
            .....   .|.|.  |.:.:.|         |:...|:.     |||.:.|::....:...|...
Zfish   271 PESPV---KAKCEDPHQNNIST---------ISQNRKSG-----KERSRFLDLKDTSQLQHEKLS 318

  Fly   612 LVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKT 676
            |......|.||      .||.|    ...|..:.:..||        :::||.:.     |:|: 
Zfish   319 LAEEVKAQKEL------VLLLH----KVLEAAQLEKRTC--------AQFLAAEG-----EQER- 359

  Fly   677 ARAVAKLSSGSNSGNDRTVRAADLEAGGDLENE-VFEDISDISDPGDLEFDEQQQQQQQQAECAV 740
               :..|..|.....:..|:...|:.    ||| :..|::        :.||...:.|...:..:
Zfish   360 ---MELLRHGERRAAELRVQLEALQQ----ENENLRRDLT--------QRDEHVAELQNSIQLLL 409

  Fly   741 SGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQI 805
            ..|....:.|.:..:..|..|...:..|.|   :.|..:|...::|::.:.   |..|....:.:
Zfish   410 QKNQTKQEVILKLSEKLTTCGEDQQYTNGL---ESETFRQMTMENEQLKDD---LKAYNIQNQYL 468

  Fly   806 NQEPSCSASTASSYETVGPGEVHQ-----RPNSDTRS--VLSPEYLSADDLQLP----------D 853
            |                  .|::|     |.:|:...  ::....|.|::.|:.          .
Zfish   469 N------------------SEIYQLTMLWRKSSEREKSLIVKCAVLEANNCQMESRYLGILQKLQ 515

  Fly   854 DEDAVRPPPPPAAAAVIITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVNMD------- 911
            :...:.|....|...::......|:.|         ..:::|:.:.  :..|..:.:|       
Zfish   516 ESQELNPEQREAVNKMLKDAVQADLNN---------AIKLNPISDY--DEYGFRIAVDYKVEDLK 569

  Fly   912 ------ALQ--------------------------QPKSACASPASSNGGVYSS----------- 933
                  ||:                          :|:....|.|...|.:.:.           
Zfish   570 LLAKIQALEFRSQNLLNQEECDGPLLARCAQLLFGRPEGELTSSAEMKGLLRTGLPHEYRVRVWR 634

  Fly   934 -------------------ELLEQFGLNLHRIEKDVQRCDRNYWYFANEN--------LDKLRNV 971
                               ||.|:...:.|.:.:.:| .|.:....:|::        :.||..|
Zfish   635 FMIQTRTKSLRERHPDRYHELCEKSRSSPHLVPRQIQ-LDLDRTLTSNKHFSPPTSPLIQKLERV 698

  Fly   972 ISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMER--------------------- 1015
            :..:.|.:..:||:||:..|.|..|::..:|:.::.|...::|.                     
Zfish   699 LQAFSWHNPTIGYVQGLNRLAAIALLVLQEEADAFWCLVVIVEHIMPPNYFTKDLVGCQADQRVL 763

  Fly  1016 ---MIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDV 1077
               |:|..|   .:..|...::..|.::..|                   |||:.|...|....:
Zfish   764 KDLMLEKLP---RLTAHLEALKVDISLITVE-------------------WFLVLFVESLPTRIL 806

  Fly  1078 FATWEVIWAAKHIASGHFVLF-LALALLETYRDIIL--SNSMDFTDVIKFF-NEMAERHNAQSV 1137
            |..|:.:     :..|..|:| .||||.:...:.||  .:|::....::.| |.:|:.....|:
Zfish   807 FKVWDAL-----LYEGSKVIFRYALALFKYREEAILKIQDSVEMYQYLRIFPNTIADGRKLTSI 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431 0/2 (0%)
TBC 923..1087 CDD:214540 36/225 (16%)
tbc1d2XP_689604.6 PH 56..146 CDD:278594
PH_TBC1D2A 57..153 CDD:269966 0/5 (0%)
TBC 621..837 CDD:214540 41/243 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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