DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and tbc1d14

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_005166496.1 Gene:tbc1d14 / 557744 ZFINID:ZDB-GENE-030131-6136 Length:711 Species:Danio rerio


Alignment Length:794 Identity:161/794 - (20%)
Similarity:256/794 - (32%) Gaps:253/794 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 QLSSCSTTGSSDCSNKSLSIDQFPMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAF 553
            ::||.|.:..:.|    |.|...|      |.|...........|..::.:.|         ::|
Zfish    22 EVSSFSNSSLNQC----LPISSKP------LTQNNVDHHVPSDTQPPNVSLSC---------KSF 67

  Fly   554 YGWLAYCRH-LSTVRTHLSGL----------VHGRIT-PEMKA----DEEGLTKERWQLLNV--- 599
            ..:...|.. .|::.:..||:          :|.|:| .|:..    |:...|      ||:   
Zfish    68 TSFNGTCEEDRSSLGSQDSGIPTLEINPPEHIHARVTIAELVVPPPHDDNPAT------LNLDIS 126

  Fly   600 NGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHY-------AFGSTTEDRKKQDETCK-HYYET 656
            :|.|..::.|.|..:              .|:.||       |.|..|.:|......|. ....|
Zfish   127 DGSLLKSSTFPRCDF--------------DLVRHYGPSGLSSAAGKGTLNRSDDISVCSVSSLST 177

  Fly   657 TMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDI-----SD 716
            ..|..|:|                      ||......:..::..|....||   ||:     |.
Zfish   178 EFSTTLSV----------------------SNEDFLDFMVTSESSAVVTFEN---EDVLHRFDSS 217

  Fly   717 ISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNE-LDEPDEEDNKQ 780
            :|.|.||.......|:|   ...|||.|   :..|:.:      |.:...||. |.....:|...
Zfish   218 LSAPIDLHGKLSSPQRQ---PVGVSGAH---EARPKRL------GPLASFFNRGLFAKRMKDTGA 270

  Fly   781 KQQQDE-------KISESESKLPDYRKLEEQINQEPSCSASTASSYETVGPGEVHQRPNSDTRSV 838
            .:.|.|       |:...:....|.|||:::..:....::::.|             |..:.|..
Zfish   271 LEGQREPGWKLFGKVPHKDLPTKDSRKLQKEYERRSGHTSNSTS-------------PKKNVRKN 322

  Fly   839 LSPEYLSADDLQLPDDEDAVRPPPPPAAA--------AVIITKASVDITNWERSPKAAEGDQMSP 895
            |..|.||...|.| ::..|..|..|...|        .::......::.:.::..|..|  ....
Zfish   323 LDFEPLSTTALIL-ENRPANLPAKPEEEAQKHRQQYEEMVAQAKKRELKDAQKRKKQLE--DRCK 384

  Fly   896 LEEQAGESGGAGVNMDALQQPKSACAS-----------PASSNGGVYS----SEL---------- 935
            |||..| :.....:.:.|...:|.|:|           |.|..|.|:|    :||          
Zfish   385 LEESIG-NAALTWSQEILPNWQSMCSSKRVRDLWWQGLPPSVRGKVWSLAIGNELNITDELYDIC 448

  Fly   936 ---------------------LEQFGL-------NLHRIEKDVQRCDRNYWYF--ANENLDKLRN 970
                                 .|..||       :|..|:.|:.|...|...|  .....|.|.:
Zfish   449 LARAKEKWNAFVAPTAAVETESEDAGLSHADREASLELIKLDISRTFPNLCIFQKGGPYHDVLHS 513

  Fly   971 VISTYVWEHLDVGYMQGMCDLVAPLLVIFD-----------------------DESLSYSCFCKL 1012
            ::..|.....||||:|||..:.|.|::..|                       |.||..:.|...
Zfish   514 ILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFANLLNKPCQMAFYRVDHSLMLTYFAAF 578

  Fly  1013 MERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDV 1077
            .....||.|.   :..||.|..     |.|::| |:|             |....:.:.|..|..
Zfish   579 EVFFEENLPK---LFAHFKNNN-----LSSDIY-LID-------------WIFTLYSKSLPLDIA 621

  Fly  1078 FATWEVIWAAKHIASGHFVLF-LALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLA 1141
            ...|:|.     ...|...|| .||.:|..|.||:  ..|||..:.:|...:.:..:|:.:.   
Zfish   622 CRVWDVF-----CRDGEEFLFRTALGILRLYEDIL--THMDFIHIAQFLTRLPDYISAEEIF--- 676

  Fly  1142 RSLVLQLQMIIENK 1155
             |.:..:.|..:||
Zfish   677 -SSITTINMNSKNK 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 49/230 (21%)
tbc1d14XP_005166496.1 COG5210 293..656 CDD:227535 86/408 (21%)
RabGAP-TBC 485..651 CDD:278964 46/192 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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