DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and tbc1d25

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001121708.1 Gene:tbc1d25 / 556338 ZFINID:ZDB-GENE-041111-25 Length:863 Species:Danio rerio


Alignment Length:324 Identity:95/324 - (29%)
Similarity:141/324 - (43%) Gaps:58/324 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   782 QQQDEKISESESKLPDYRKLEEQINQEPSCSASTAS-SY-ETVGP-------GEVHQRPNSDTRS 837
            |.|.||.|.:.:.||..:.|..|:.:..|......| || |.|.|       .|.|...||..: 
Zfish   123 QLQGEKRSLASAALPFTQSLLSQVGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHNYLNSQGQ- 186

  Fly   838 VLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWER----SPKAAEGDQMSPLEE 898
            :..||     :|:|......|...........::......:|..||    ..|..|.||:     
Zfish   187 LSRPE-----ELRLRIYHGGVESSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYDQL----- 241

  Fly   899 QAGESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFA-- 961
                              ||...:..       |||.||....|   :.|||.|.||.:.|:|  
Zfish   242 ------------------KSEWTARV-------SSEELEFIRGN---VLKDVLRTDRAHPYYAGS 278

  Fly   962 --NENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENF-PSG 1023
              :.:|..|.::::|:...|..|.|.|||.|:.:|:|.:.|:|:.::.|||.:|:|:..|| |.|
Zfish   279 EDSPHLTALTDLLTTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDG 343

  Fly  1024 GAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAA 1087
            ..|.:.|.:::.|:|..|.|.|..:.|.| ....:|||||.||:.|||..:||.....||.|::
Zfish   344 QLMSIKFQHLKLLLQYSDPEFYSYLVSKG-ADDLFFCYRWLLLELKREFAFDDALRMLEVTWSS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 61/168 (36%)
tbc1d25NP_001121708.1 TBC 198..420 CDD:214540 71/243 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.