DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and grtp1b

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001017810.1 Gene:grtp1b / 550508 ZFINID:ZDB-GENE-050417-346 Length:349 Species:Danio rerio


Alignment Length:254 Identity:53/254 - (20%)
Similarity:107/254 - (42%) Gaps:39/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   927 NGGVYSS---------ELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDK-LRNVISTYVWEHLD 981
            |.|.|.:         ::.|....::||...|    :..:.:.:...|.| |.||:..|...:.|
Zfish   102 NPGYYQALLKTEQHDPKIEEVIHADMHRTFPD----NIQFRHSSQSCLQKALFNVLLAYGHHNKD 162

  Fly   982 VGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPS----GGAMDMHFANMRSLIQILDS 1042
            |||.|||..:...||:|..||..|:.....|:.|::.::.:    |..:|...  :..|::....
Zfish   163 VGYCQGMNFIAGYLLIITKDEEKSFWLMVALIGRILPDYYTQTMLGLKVDQEV--LGELVKSKVP 225

  Fly  1043 EMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF-LALALLET 1106
            .::..|:.: |........|||:..:...|..:.|...|:.::     ..|..:|| :||.|:..
Zfish   226 AVWQTMNQH-DVMWTLVVSRWFICLYVDVLPVETVLRIWDCLF-----YEGSKILFRVALTLIRH 284

  Fly  1107 YRDIILSNSMDFTDVIKFFNEMAER---HNAQSVLQ--------LARSLVLQLQMIIEN 1154
            .:::| |.:....::.:.|.::...   .:..|.:|        |:.:.:.:|:.:..|
Zfish   285 NQNLI-SQAKSLPEICEGFKQITRGEYVEDCHSFMQKIFMEPGGLSTATITKLRKMCRN 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 39/173 (23%)
grtp1bNP_001017810.1 TBC 76..289 CDD:214540 45/198 (23%)
Blue background indicates that the domain is not in the aligned region.

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