DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and tbc1d15

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_005159143.1 Gene:tbc1d15 / 492676 ZFINID:ZDB-GENE-041111-251 Length:665 Species:Danio rerio


Alignment Length:851 Identity:153/851 - (17%)
Similarity:266/851 - (31%) Gaps:402/851 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 NGYTEAEEAEDIDKDAFWAYALNINVDEI--VYVHCHQSRGEDSGGTVILVG-QDGVQRPPIHFP 397
            ||...:....:.:|.||     :.||.::  |.|.|       .|.:.:... :||...|.|||.
Zfish   109 NGDGGSNHVNEQNKRAF-----SFNVCDLRSVTVKC-------EGWSYLTFRLKDGTALPAIHFH 161

  Fly   398 EGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILPSVMESVDETPIDYVFRI 462
            :||                             .|.||  .|:|:.:      .::|:|.|....|
Zfish   162 QGG-----------------------------SKAFL--DSLRKSV------QINESPDDESVLI 189

  Fly   463 V---SKSRHEEFAATHSILD-----FVRSTPRRAQLSSCSTT--GSSDCSN--------KSLSID 509
            |   ||:..:.|   .::||     ||:   ::.:....:||  |.|..:|        ..|...
Zfish   190 VSTYSKAFSQSF---ENLLDDTNYGFVQ---QKFKKDPYTTTLGGFSKVTNYLFDAFRAPELECQ 248

  Fly   510 QFPME------SPLI--LQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCRHLSTV 566
            |.|.|      ..||  |:..||::...                 ::|:|...|           
Zfish   249 QRPAEEVADVLGELIPGLEINQQEEPGF-----------------EVITRLDLG----------- 285

  Fly   567 RTHLSGLVHGRITPEMKADEEG-LTKERW-QLLNVNGVLENATEFYRLVYFGGVQPELRQEVWPY 629
                         |..:....| :|.|.| :..::.|.:.|.......::.||:...:|:|.|.:
Zfish   286 -------------PRPEMQRTGPVTMEEWAKYQDLEGRMTNLPHLKDAIFKGGLCHAVRKEAWKF 337

  Fly   630 LLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNSGNDRT 694
            |||::.:.||.|:||                      ::|:|:.::..|...:..|.|       
Zfish   338 LLGYFPWSSTHEERK----------------------LLQKRKTDEYFRMKLQWKSVS------- 373

  Fly   695 VRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTD 759
                                            |:|:::                           
Zfish   374 --------------------------------EEQERR--------------------------- 379

  Fly   760 SGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETVGP 824
                                            .|:|.|||.|                       
Zfish   380 --------------------------------NSRLRDYRSL----------------------- 389

  Fly   825 GEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWERSPKAAE 889
                                                                             
Zfish   390 ----------------------------------------------------------------- 389

  Fly   890 GDQMSPLEEQAGESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCD 954
                                                                    |||||.|.|
Zfish   390 --------------------------------------------------------IEKDVNRTD 398

  Fly   955 RNYWYFANENLDK-----LRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLME 1014
            ||..::  |.||.     |.:::.||.....|:||:|||.||::|:|.:.::|..::.||...|:
Zfish   399 RNNKFY--EGLDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPILFVMENEVDAFWCFVSFMD 461

  Fly  1015 RMIENFPSG-GAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVF 1078
            .|.|||... ..|......:.:|:::||...::.:::. |..:.|||:||.|:.|||||.:.||.
Zfish   462 EMHENFEEQMQGMKTQLIQLSTLLRLLDLAFWNYLEAQ-DSGYLYFCFRWLLIRFKRELHFQDVL 525

  Fly  1079 ATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARS 1143
            ..|||:|.  .:...:|.|.:..|:|::.:..|:.....|.:::|..||::.:.:.:.:|..:.|
Zfish   526 RLWEVMWT--RLPCQNFHLLVCCAILDSEKQKIMDRKYGFNEILKHINELSMKLDIEEILSKSES 588

  Fly  1144 LVLQLQ 1149
            :.:|::
Zfish   589 ICMQIK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431 30/135 (22%)
TBC 923..1087 CDD:214540 55/169 (33%)
tbc1d15XP_005159143.1 DUF3548 4..220 CDD:192931 36/165 (22%)
TBC 322..557 CDD:214540 85/503 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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