DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and grtp1

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001005632.1 Gene:grtp1 / 448089 XenbaseID:XB-GENE-950226 Length:342 Species:Xenopus tropicalis


Alignment Length:217 Identity:52/217 - (23%)
Similarity:98/217 - (45%) Gaps:37/217 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   929 GVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDK-LRNVISTYVWEHLDVGYMQGMCDLV 992
            |..:.:||:....:|:|...|.....:|    ||.:|.| |.||:..|...:..|||.|||..:.
 Frog   106 GEKNPKLLDLVITDLNRTFPDNVLFQKN----ANPSLQKDLYNVLVAYGQHNKTVGYCQGMNFIA 166

  Fly   993 APLLVIFDDESLSYSCFCKLMERMIENFPSGGAM-----------DMHFANMRSLIQILDSE--M 1044
            ..|:::..||..::.....|:.:::.::.| .||           |:....:.|:.|::::.  |
 Frog   167 GYLILVTKDEEKAFWLMDALIGQILPDYYS-PAMTGLKTDQEVLGDLVKKKIPSVAQLIETHGVM 230

  Fly  1045 YDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF-LALALLETYR 1108
            :.|:.|           |||:..|...|..:.|...|:.::     ..|..|:| :||.|::..:
 Frog   231 WTLLVS-----------RWFICLFIDILPVETVLRIWDCLF-----FEGSKVIFRVALTLIKQSQ 279

  Fly  1109 DIILSNSMDFTDVIKFFNEMAE 1130
            ..|: .:.:|.|:...|.|:.:
 Frog   280 ASIM-EARNFPDICDKFKEITK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 41/171 (24%)
grtp1NP_001005632.1 TBC 69..283 CDD:214540 47/197 (24%)
Blue background indicates that the domain is not in the aligned region.

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