DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and CG42795

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster


Alignment Length:1234 Identity:222/1234 - (17%)
Similarity:376/1234 - (30%) Gaps:371/1234 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SVKKEVKQLME----------------------EAVTKKYVHEESSSVTSLCGAVEACLSQGLRR 60
            |.:|:.|:|.|                      .::||:....||||.|.:....|...|....:
  Fly  1063 SAEKQRKELSEMEAEYPIKSERIPSTADLESRFNSLTKQMSSSESSSKTPIDLKDEDRPSGSSSK 1127

  Fly    61 RALGLFKTSSTTALLH------------------------KIAKSCPEAEHISKLVQEIEASD-- 99
            ..    |.|..|:.||                        ||.:...|...|.||....|..|  
  Fly  1128 NQ----KDSEKTSKLHKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKLPSTAELEDRF 1188

  Fly   100 ------PSKRSSSSSDSFQRPPMLKKSSS----NSMSTGTNAAASTSSASASISVSASTSSMSLA 154
                  .|.:.||.|.:.:.||..::|.|    ........|...||.....|:...|..|..  
  Fly  1189 NALERKMSVQKSSPSKNKKEPPDEEESKSTKEPEEPEESEKANEKTSGRQTPIAKKDSKDSDQ-- 1251

  Fly   155 SMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGSILSSLLVGPCALEFTRAKTAD 219
                        :|..||      .|.|...::|..|.           :..|.:.|....:|:.
  Fly  1252 ------------KKSETK------ENQSPTKNQDEKVK-----------VKSPKSEEMIEKETSS 1287

  Fly   220 HYWTDPHADELVQRHRISSCRRSSSTCSRPAI---------------INFKRSLNTSSDEAGTGS 269
            :...|.|..|.....::...|..||......|               ...|.:....|.:.|...
  Fly  1288 NPKEDSHESEAATNKKVEGNRELSSEKGDHKIKEKSEEAPGKAGKETAETKNANVKDSSKKGDSQ 1352

  Fly   270 FKSIASASVAK---DYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLTIKWT- 330
            ....|..||::   |...|..:|:.:.....:...:..|....|....:.:|.:.:.|..::.| 
  Fly  1353 KNEAAKTSVSQTESDLKPSSKENSTSKDAEQEKTPRKSPPSTEELEKRFNALEKQMSTTNLETTK 1417

  Fly   331 -PNQ----LMNGYTEAEEAEDIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQ 390
             |:|    ..:..|.||........:|......:|    |.:...|||.|      :.|..:..:
  Fly  1418 EPDQTKPATKSQSTSAEVKTQKSMKSFDDKIKEVN----VAIEKEQSRVE------VEVNAEKKR 1472

  Fly   391 RPPIHFPEG--GHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILP--SVMESV 451
            :.....|:.  |..||.......|.......:||  |...:.|.:   .:::||:..  ...|:|
  Fly  1473 KNVEEAPKNKEGDSQQPEESQHKGKNQRRASEPP--STEDLEKRY---ETLKRRMSSKNQFSETV 1532

  Fly   452 DETPIDYVFRIVSKSRHEEFAATHSILDFVRSTPRRAQLSSCSTTGSSDCSNKSLSIDQF----- 511
            ||........::|::..|:           :..|....|.|.......|..|....:|:.     
  Fly  1533 DEALERIQQEVISEAVEEK-----------KPPPSTEDLESRFEALHGDKKNVESKMDETKHVDV 1586

  Fly   512 ---------------PMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCR 561
                           |.|.|::.:....|||.|       ||.:.|.||.|....          
  Fly  1587 AIEAHIPSPPPPPPPPKERPVLAEPVLHQQQAL-------IEELQSKMRGQSPGE---------- 1634

  Fly   562 HLSTVRTHLSGLVHGRITPEMK-----------ADE-----------EGLTKERWQL-------- 596
                     ..|....|.|:.:           .||           .....|:||.        
  Fly  1635 ---------ENLKPSEINPQRRQKKLLQRPTPMGDETSEAPANTAYYRAANHEQWQQRMVRRFSD 1690

  Fly   597 LNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEW 661
            |.....|||..:|            |.::::                       |.:|:    :.
  Fly  1691 LPSRADLENRLQF------------LERQLY-----------------------KKFYK----QR 1716

  Fly   662 LAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFD 726
            .|.|:.|..|         .||.........|..|..  ||.|.||..|......:|: ..|:..
  Fly  1717 CASDSEVASR---------VKLPPEDQPSTSRQARKQ--EAEGQLEQRVLALEKQLSE-NSLKLL 1769

  Fly   727 EQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPD---------------EE 776
            |..:::.:.|:.:.|...|:.:.|.   .|..:.....::..||:|.|               .:
  Fly  1770 EAMRERHRSADDSGSPRRLSTETID---ATGKELVRYTQNIGELEEVDAHKPINISINIKMMVNK 1831

  Fly   777 DNKQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETV--GPGEVH-------QRPN 832
            |::.||.:.|....:|.......:||:|:.:|.:.:.|.....|.:  .|.::.       |..|
  Fly  1832 DSESKQPKGESKPTTEDLTRRLEQLEQQLLEERAKNGSIPPENEVLEEKPEKLEEKDSCKKQEKN 1896

  Fly   833 SDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAA---------------AAVIITKASVDITNWE 882
            ...:.|...|   .:..::|.|    |...|.:|               |.|:.|:.||...|..
  Fly  1897 CHNQHVKGDE---VEKTEIPAD----RKIEPASAKETKTLENVEKAQTRAKVVDTEKSVKDQNAV 1954

  Fly   883 RSPKAAEGDQMSPLEEQA--------GESGGAGVNMD----------------ALQQPKSACASP 923
            ...|:.: ||...::::|        .:|..||.:.|                |.:.||:..:..
  Fly  1955 TDEKSVQ-DQNVVVDKKADRKILDKKDKSPAAGKSEDTKQTSGKKEKSEDIKQASEAPKAGASKE 2018

  Fly   924 ASSNGGVYSSEL---------LEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEH 979
            .|:.|....::|         |::.......:|.:..:...|..........|....::....| 
  Fly  2019 TSTRGKPSETKLEKPTTKESVLKETFPKKENLESEKPKSKENEATKTETQKSKETPTVAVSPKE- 2082

  Fly   980 LDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSE 1043
                      ..|:...:....|::..|...:|.|:|:.|....|.||   .|.::::.::|:|
  Fly  2083 ----------SKVSSKQMTEKKETIKDSSSKELPEKMVINSTDVGPMD---PNGKTVVLLMDNE 2133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049 49/250 (20%)
PH_RUTBC 292..466 CDD:275431 34/183 (19%)
TBC 923..1087 CDD:214540 21/130 (16%)
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412 187/1045 (18%)
PTZ00121 <1740..2340 CDD:173412 78/422 (18%)
PTZ00449 <2270..2610 CDD:185628
Blue background indicates that the domain is not in the aligned region.

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