DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and CG42795

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster


Alignment Length:1234 Identity:222/1234 - (17%)
Similarity:376/1234 - (30%) Gaps:371/1234 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SVKKEVKQLME----------------------EAVTKKYVHEESSSVTSLCGAVEACLSQGLRR 60
            |.:|:.|:|.|                      .::||:....||||.|.:....|...|....:
  Fly  1063 SAEKQRKELSEMEAEYPIKSERIPSTADLESRFNSLTKQMSSSESSSKTPIDLKDEDRPSGSSSK 1127

  Fly    61 RALGLFKTSSTTALLH------------------------KIAKSCPEAEHISKLVQEIEASD-- 99
            ..    |.|..|:.||                        ||.:...|...|.||....|..|  
  Fly  1128 NQ----KDSEKTSKLHKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKLPSTAELEDRF 1188

  Fly   100 ------PSKRSSSSSDSFQRPPMLKKSSS----NSMSTGTNAAASTSSASASISVSASTSSMSLA 154
                  .|.:.||.|.:.:.||..::|.|    ........|...||.....|:...|..|..  
  Fly  1189 NALERKMSVQKSSPSKNKKEPPDEEESKSTKEPEEPEESEKANEKTSGRQTPIAKKDSKDSDQ-- 1251

  Fly   155 SMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGSILSSLLVGPCALEFTRAKTAD 219
                        :|..||      .|.|...::|..|.           :..|.:.|....:|:.
  Fly  1252 ------------KKSETK------ENQSPTKNQDEKVK-----------VKSPKSEEMIEKETSS 1287

  Fly   220 HYWTDPHADELVQRHRISSCRRSSSTCSRPAI---------------INFKRSLNTSSDEAGTGS 269
            :...|.|..|.....::...|..||......|               ...|.:....|.:.|...
  Fly  1288 NPKEDSHESEAATNKKVEGNRELSSEKGDHKIKEKSEEAPGKAGKETAETKNANVKDSSKKGDSQ 1352

  Fly   270 FKSIASASVAK---DYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLTIKWT- 330
            ....|..||::   |...|..:|:.:.....:...:..|....|....:.:|.:.:.|..::.| 
  Fly  1353 KNEAAKTSVSQTESDLKPSSKENSTSKDAEQEKTPRKSPPSTEELEKRFNALEKQMSTTNLETTK 1417

  Fly   331 -PNQ----LMNGYTEAEEAEDIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQ 390
             |:|    ..:..|.||........:|......:|    |.:...|||.|      :.|..:..:
  Fly  1418 EPDQTKPATKSQSTSAEVKTQKSMKSFDDKIKEVN----VAIEKEQSRVE------VEVNAEKKR 1472

  Fly   391 RPPIHFPEG--GHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILP--SVMESV 451
            :.....|:.  |..||.......|.......:||  |...:.|.:   .:::||:..  ...|:|
  Fly  1473 KNVEEAPKNKEGDSQQPEESQHKGKNQRRASEPP--STEDLEKRY---ETLKRRMSSKNQFSETV 1532

  Fly   452 DETPIDYVFRIVSKSRHEEFAATHSILDFVRSTPRRAQLSSCSTTGSSDCSNKSLSIDQF----- 511
            ||........::|::..|:           :..|....|.|.......|..|....:|:.     
  Fly  1533 DEALERIQQEVISEAVEEK-----------KPPPSTEDLESRFEALHGDKKNVESKMDETKHVDV 1586

  Fly   512 ---------------PMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCR 561
                           |.|.|::.:....|||.|       ||.:.|.||.|....          
  Fly  1587 AIEAHIPSPPPPPPPPKERPVLAEPVLHQQQAL-------IEELQSKMRGQSPGE---------- 1634

  Fly   562 HLSTVRTHLSGLVHGRITPEMK-----------ADE-----------EGLTKERWQL-------- 596
                     ..|....|.|:.:           .||           .....|:||.        
  Fly  1635 ---------ENLKPSEINPQRRQKKLLQRPTPMGDETSEAPANTAYYRAANHEQWQQRMVRRFSD 1690

  Fly   597 LNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEW 661
            |.....|||..:|            |.::::                       |.:|:    :.
  Fly  1691 LPSRADLENRLQF------------LERQLY-----------------------KKFYK----QR 1716

  Fly   662 LAVDAIVQQREKEKTARAVAKLSSGSNSGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFD 726
            .|.|:.|..|         .||.........|..|..  ||.|.||..|......:|: ..|:..
  Fly  1717 CASDSEVASR---------VKLPPEDQPSTSRQARKQ--EAEGQLEQRVLALEKQLSE-NSLKLL 1769

  Fly   727 EQQQQQQQQAECAVSGNHLTVKPIPRAMKTSTDSGHVDESFNELDEPD---------------EE 776
            |..:::.:.|:.:.|...|:.:.|.   .|..:.....::..||:|.|               .:
  Fly  1770 EAMRERHRSADDSGSPRRLSTETID---ATGKELVRYTQNIGELEEVDAHKPINISINIKMMVNK 1831

  Fly   777 DNKQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETV--GPGEVH-------QRPN 832
            |::.||.:.|....:|.......:||:|:.:|.:.:.|.....|.:  .|.::.       |..|
  Fly  1832 DSESKQPKGESKPTTEDLTRRLEQLEQQLLEERAKNGSIPPENEVLEEKPEKLEEKDSCKKQEKN 1896

  Fly   833 SDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAA---------------AAVIITKASVDITNWE 882
            ...:.|...|   .:..::|.|    |...|.:|               |.|:.|:.||...|..
  Fly  1897 CHNQHVKGDE---VEKTEIPAD----RKIEPASAKETKTLENVEKAQTRAKVVDTEKSVKDQNAV 1954

  Fly   883 RSPKAAEGDQMSPLEEQA--------GESGGAGVNMD----------------ALQQPKSACASP 923
            ...|:.: ||...::::|        .:|..||.:.|                |.:.||:..:..
  Fly  1955 TDEKSVQ-DQNVVVDKKADRKILDKKDKSPAAGKSEDTKQTSGKKEKSEDIKQASEAPKAGASKE 2018

  Fly   924 ASSNGGVYSSEL---------LEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEH 979
            .|:.|....::|         |::.......:|.:..:...|..........|....::....| 
  Fly  2019 TSTRGKPSETKLEKPTTKESVLKETFPKKENLESEKPKSKENEATKTETQKSKETPTVAVSPKE- 2082

  Fly   980 LDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSE 1043
                      ..|:...:....|::..|...:|.|:|:.|....|.||   .|.::::.::|:|
  Fly  2083 ----------SKVSSKQMTEKKETIKDSSSKELPEKMVINSTDVGPMD---PNGKTVVLLMDNE 2133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855 38/208 (18%)
PH_RUTBC 292..466 CDD:275431 34/183 (19%)
TBC 923..1087 CDD:214540 21/130 (16%)
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:278964
DUF4682 560..684 CDD:292361
DBP 1112..1415 CDD:289157 59/337 (18%)
SWIRM-assoc_2 <2376..2482 CDD:293105
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456595
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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